Protein–RNA interactions for Protein: Q6ZV60

LINC00173, Putative uncharacterized protein encoded by LINC00173, humanhuman

Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173Q6ZV60 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00173Q6ZV60 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00173Q6ZV60 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
LINC00173Q6ZV60 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00173Q6ZV60 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
LINC00173Q6ZV60 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00173Q6ZV60 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC13.11□□□□□ -0.31
LINC00173Q6ZV60 AC073210.2-201ENST00000430369 194 ntBASIC13.11□□□□□ -0.31
LINC00173Q6ZV60 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00173Q6ZV60 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC13.11□□□□□ -0.31
LINC00173Q6ZV60 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.11□□□□□ -0.31
LINC00173Q6ZV60 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC13.11□□□□□ -0.31
LINC00173Q6ZV60 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
LINC00173Q6ZV60 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00173Q6ZV60 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC13.11□□□□□ -0.31
LINC00173Q6ZV60 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00173Q6ZV60 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00173Q6ZV60 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00173Q6ZV60 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LINC00173Q6ZV60 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00173Q6ZV60 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00173Q6ZV60 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00173Q6ZV60 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00173Q6ZV60 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
LINC00173Q6ZV60 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00173Q6ZV60 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LINC00173Q6ZV60 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC13.11□□□□□ -0.31
LINC00173Q6ZV60 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00173Q6ZV60 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00173Q6ZV60 AC007950.2-201ENST00000615045 2347 ntBASIC13.11□□□□□ -0.31
LINC00173Q6ZV60 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 PHGDH-209ENST00000641074 1780 ntBASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 AL603756.1-201ENST00000606511 2163 ntBASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 HACD1-201ENST00000326961 773 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 TSPY21P-201ENST00000433481 731 ntBASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 TSPY23P-201ENST00000440136 739 ntBASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 YBX1P10-201ENST00000444752 975 ntBASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 AL357033.4-201ENST00000617703 1807 ntBASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 AL138688.1-201ENST00000624851 1594 ntBASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00173Q6ZV60 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 HSCB-202ENST00000398941 955 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 AC137761.2-201ENST00000561729 223 ntBASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 AC145350.3-201ENST00000569033 163 ntBASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 OR10C1-204ENST00000622521 1039 ntBASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00173Q6ZV60 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms