Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC13.67□□□□□ -0.22
MRPL54Q6P161 AK1-201ENST00000223836 736 ntTSL 3 BASIC13.67□□□□□ -0.22
MRPL54Q6P161 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL54Q6P161 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL54Q6P161 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL54Q6P161 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL54Q6P161 SUDS3P1-201ENST00000505831 966 ntBASIC13.67□□□□□ -0.22
MRPL54Q6P161 KRT18P16-201ENST00000510337 1294 ntBASIC13.67□□□□□ -0.22
MRPL54Q6P161 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC13.67□□□□□ -0.22
MRPL54Q6P161 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC13.67□□□□□ -0.22
MRPL54Q6P161 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
MRPL54Q6P161 AC008694.1-202ENST00000636953 945 ntBASIC13.67□□□□□ -0.22
MRPL54Q6P161 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC13.67□□□□□ -0.22
MRPL54Q6P161 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL54Q6P161 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL54Q6P161 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL54Q6P161 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL54Q6P161 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL54Q6P161 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL54Q6P161 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
MRPL54Q6P161 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC13.67□□□□□ -0.22
MRPL54Q6P161 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL54Q6P161 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC13.67□□□□□ -0.22
MRPL54Q6P161 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
MRPL54Q6P161 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.67□□□□□ -0.22
MRPL54Q6P161 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL54Q6P161 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL54Q6P161 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.67□□□□□ -0.22
MRPL54Q6P161 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
MRPL54Q6P161 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.67□□□□□ -0.22
MRPL54Q6P161 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL54Q6P161 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC13.67□□□□□ -0.22
MRPL54Q6P161 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL54Q6P161 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL54Q6P161 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.67□□□□□ -0.22
MRPL54Q6P161 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
MRPL54Q6P161 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.67□□□□□ -0.22
MRPL54Q6P161 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL54Q6P161 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
MRPL54Q6P161 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL54Q6P161 MYLKP1-201ENST00000509077 1580 ntBASIC13.66□□□□□ -0.22
MRPL54Q6P161 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL54Q6P161 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
MRPL54Q6P161 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
MRPL54Q6P161 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13.66□□□□□ -0.22
MRPL54Q6P161 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
MRPL54Q6P161 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL54Q6P161 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL54Q6P161 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL54Q6P161 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
MRPL54Q6P161 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL54Q6P161 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL54Q6P161 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC13.66□□□□□ -0.22
MRPL54Q6P161 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL54Q6P161 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
MRPL54Q6P161 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL54Q6P161 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL54Q6P161 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL54Q6P161 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL54Q6P161 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL54Q6P161 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
MRPL54Q6P161 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC13.66□□□□□ -0.22
MRPL54Q6P161 KRT18P61-201ENST00000585825 1298 ntBASIC13.66□□□□□ -0.22
MRPL54Q6P161 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL54Q6P161 AC005181.1-201ENST00000604782 1256 ntBASIC13.66□□□□□ -0.22
MRPL54Q6P161 AC110285.6-201ENST00000617652 491 ntBASIC13.66□□□□□ -0.22
MRPL54Q6P161 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL54Q6P161 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL54Q6P161 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL54Q6P161 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.66□□□□□ -0.22
MRPL54Q6P161 AC106886.4-201ENST00000623557 2502 ntBASIC13.66□□□□□ -0.22
MRPL54Q6P161 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.66□□□□□ -0.22
MRPL54Q6P161 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
MRPL54Q6P161 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL54Q6P161 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL54Q6P161 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC13.66□□□□□ -0.22
MRPL54Q6P161 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.66□□□□□ -0.22
MRPL54Q6P161 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL54Q6P161 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL54Q6P161 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
MRPL54Q6P161 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL54Q6P161 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL54Q6P161 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.66□□□□□ -0.22
MRPL54Q6P161 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL54Q6P161 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL54Q6P161 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL54Q6P161 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.65□□□□□ -0.22
MRPL54Q6P161 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL54Q6P161 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL54Q6P161 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL54Q6P161 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL54Q6P161 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL54Q6P161 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL54Q6P161 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL54Q6P161 LINC02199-201ENST00000506655 2702 ntBASIC13.65□□□□□ -0.22
MRPL54Q6P161 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC13.65□□□□□ -0.22
MRPL54Q6P161 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL54Q6P161 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL54Q6P161 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL54Q6P161 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms