Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX6-1P78426 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX6-1P78426 TSPY19P-201ENST00000418461 509 ntBASIC15.93■□□□□ 0.14
NKX6-1P78426 TSPY18P-201ENST00000441642 509 ntBASIC15.93■□□□□ 0.14
NKX6-1P78426 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.93■□□□□ 0.14
NKX6-1P78426 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.93■□□□□ 0.14
NKX6-1P78426 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.93■□□□□ 0.14
NKX6-1P78426 AP000867.3-201ENST00000524675 377 ntBASIC15.93■□□□□ 0.14
NKX6-1P78426 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.93■□□□□ 0.14
NKX6-1P78426 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX6-1P78426 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.93■□□□□ 0.14
NKX6-1P78426 AL732292.2-201ENST00000609649 430 ntBASIC15.93■□□□□ 0.14
NKX6-1P78426 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX6-1P78426 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.93■□□□□ 0.14
NKX6-1P78426 AC004263.2-201ENST00000617183 678 ntBASIC15.93■□□□□ 0.14
NKX6-1P78426 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.93■□□□□ 0.14
NKX6-1P78426 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
NKX6-1P78426 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
NKX6-1P78426 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.93■□□□□ 0.14
NKX6-1P78426 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NKX6-1P78426 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX6-1P78426 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NKX6-1P78426 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NKX6-1P78426 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX6-1P78426 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
NKX6-1P78426 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-1P78426 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
NKX6-1P78426 AC093525.10-201ENST00000625130 1569 ntBASIC15.92■□□□□ 0.14
NKX6-1P78426 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-1P78426 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
NKX6-1P78426 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-1P78426 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-1P78426 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-1P78426 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC15.92■□□□□ 0.14
NKX6-1P78426 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.92■□□□□ 0.14
NKX6-1P78426 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-1P78426 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-1P78426 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-1P78426 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
NKX6-1P78426 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-1P78426 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.92■□□□□ 0.14
NKX6-1P78426 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.92■□□□□ 0.14
NKX6-1P78426 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.92■□□□□ 0.14
NKX6-1P78426 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-1P78426 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.92■□□□□ 0.14
NKX6-1P78426 AC079602.3-201ENST00000623931 403 ntBASIC15.92■□□□□ 0.14
NKX6-1P78426 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-1P78426 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-1P78426 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-1P78426 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-1P78426 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-1P78426 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
NKX6-1P78426 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-1P78426 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-1P78426 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
NKX6-1P78426 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.92■□□□□ 0.14
NKX6-1P78426 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.92■□□□□ 0.14
NKX6-1P78426 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-1P78426 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-1P78426 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
NKX6-1P78426 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-1P78426 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-1P78426 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.92■□□□□ 0.14
NKX6-1P78426 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-1P78426 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-1P78426 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NKX6-1P78426 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
NKX6-1P78426 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.92■□□□□ 0.14
NKX6-1P78426 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
NKX6-1P78426 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
NKX6-1P78426 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
NKX6-1P78426 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.91■□□□□ 0.14
NKX6-1P78426 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.91■□□□□ 0.14
NKX6-1P78426 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX6-1P78426 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
NKX6-1P78426 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.91■□□□□ 0.14
NKX6-1P78426 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NKX6-1P78426 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX6-1P78426 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
NKX6-1P78426 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
NKX6-1P78426 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
NKX6-1P78426 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.91■□□□□ 0.14
NKX6-1P78426 TSPY22P-201ENST00000427496 604 ntBASIC15.91■□□□□ 0.14
NKX6-1P78426 HLA-F-220ENST00000434407 884 ntBASIC15.91■□□□□ 0.14
NKX6-1P78426 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX6-1P78426 LINC00265-3P-201ENST00000447588 903 ntBASIC15.91■□□□□ 0.14
NKX6-1P78426 AC079776.4-201ENST00000511039 504 ntBASIC15.91■□□□□ 0.14
NKX6-1P78426 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NKX6-1P78426 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX6-1P78426 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.91■□□□□ 0.14
NKX6-1P78426 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NKX6-1P78426 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.91■□□□□ 0.14
NKX6-1P78426 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
NKX6-1P78426 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
NKX6-1P78426 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NKX6-1P78426 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NKX6-1P78426 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX6-1P78426 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NKX6-1P78426 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NKX6-1P78426 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms