Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCNA1P78396 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCNA1P78396 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.49■□□□□ 0.87
CCNA1P78396 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCNA1P78396 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCNA1P78396 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCNA1P78396 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCNA1P78396 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.48■□□□□ 0.87
CCNA1P78396 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CCNA1P78396 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CCNA1P78396 YBX2P1-201ENST00000394192 760 ntBASIC20.48■□□□□ 0.87
CCNA1P78396 RPSAP43-201ENST00000402237 625 ntBASIC20.48■□□□□ 0.87
CCNA1P78396 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.48■□□□□ 0.87
CCNA1P78396 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCNA1P78396 AC122714.2-201ENST00000502787 707 ntBASIC20.48■□□□□ 0.87
CCNA1P78396 AC055717.3-201ENST00000622967 595 ntBASIC20.48■□□□□ 0.87
CCNA1P78396 PGM5P2-202ENST00000637225 1043 ntBASIC20.48■□□□□ 0.87
CCNA1P78396 AC079781.4-201ENST00000641908 219 ntBASIC20.48■□□□□ 0.87
CCNA1P78396 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCNA1P78396 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCNA1P78396 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.48■□□□□ 0.87
CCNA1P78396 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCNA1P78396 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCNA1P78396 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCNA1P78396 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCNA1P78396 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.47■□□□□ 0.87
CCNA1P78396 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCNA1P78396 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCNA1P78396 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CCNA1P78396 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CCNA1P78396 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCNA1P78396 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.47■□□□□ 0.87
CCNA1P78396 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.47■□□□□ 0.87
CCNA1P78396 AC096633.1-201ENST00000422446 749 ntBASIC20.47■□□□□ 0.87
CCNA1P78396 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.47■□□□□ 0.87
CCNA1P78396 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.47■□□□□ 0.87
CCNA1P78396 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.47■□□□□ 0.87
CCNA1P78396 AC006557.2-201ENST00000592985 1240 ntBASIC20.47■□□□□ 0.87
CCNA1P78396 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.47■□□□□ 0.87
CCNA1P78396 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.47■□□□□ 0.87
CCNA1P78396 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCNA1P78396 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCNA1P78396 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CCNA1P78396 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CCNA1P78396 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCNA1P78396 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.46■□□□□ 0.87
CCNA1P78396 PMPCAP1-201ENST00000508114 1576 ntBASIC20.46■□□□□ 0.87
CCNA1P78396 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CCNA1P78396 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CCNA1P78396 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CCNA1P78396 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCNA1P78396 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCNA1P78396 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.46■□□□□ 0.87
CCNA1P78396 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.46■□□□□ 0.87
CCNA1P78396 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.46■□□□□ 0.87
CCNA1P78396 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCNA1P78396 BX005266.1-201ENST00000473402 457 ntBASIC20.46■□□□□ 0.87
CCNA1P78396 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.46■□□□□ 0.87
CCNA1P78396 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CCNA1P78396 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.46■□□□□ 0.87
CCNA1P78396 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCNA1P78396 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCNA1P78396 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCNA1P78396 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.46■□□□□ 0.87
CCNA1P78396 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCNA1P78396 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCNA1P78396 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CCNA1P78396 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCNA1P78396 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.46■□□□□ 0.87
CCNA1P78396 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.46■□□□□ 0.87
CCNA1P78396 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCNA1P78396 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCNA1P78396 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCNA1P78396 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCNA1P78396 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCNA1P78396 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCNA1P78396 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.45■□□□□ 0.86
CCNA1P78396 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCNA1P78396 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCNA1P78396 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.45■□□□□ 0.86
CCNA1P78396 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.45■□□□□ 0.86
CCNA1P78396 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.45■□□□□ 0.86
CCNA1P78396 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
CCNA1P78396 AC002347.1-201ENST00000569543 541 ntBASIC20.45■□□□□ 0.86
CCNA1P78396 AC073592.4-201ENST00000623827 446 ntBASIC20.45■□□□□ 0.86
CCNA1P78396 AC005593.1-201ENST00000624894 515 ntBASIC20.45■□□□□ 0.86
CCNA1P78396 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCNA1P78396 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CCNA1P78396 ANO7L1-203ENST00000602586 1720 ntBASIC20.44■□□□□ 0.86
CCNA1P78396 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CCNA1P78396 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCNA1P78396 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCNA1P78396 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CCNA1P78396 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCNA1P78396 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.44■□□□□ 0.86
CCNA1P78396 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCNA1P78396 AC004832.2-201ENST00000426397 482 ntBASIC20.44■□□□□ 0.86
CCNA1P78396 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.44■□□□□ 0.86
CCNA1P78396 AC009947.1-201ENST00000444350 727 ntBASIC20.44■□□□□ 0.86
CCNA1P78396 PRYP5-201ENST00000451909 266 ntBASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms