Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA4AP68366 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.98■□□□□ 0.31
TUBA4AP68366 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TUBA4AP68366 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA4AP68366 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.98■□□□□ 0.31
TUBA4AP68366 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA4AP68366 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA4AP68366 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA4AP68366 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA4AP68366 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA4AP68366 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TUBA4AP68366 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA4AP68366 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA4AP68366 NIFKP9-201ENST00000419265 221 ntBASIC16.98■□□□□ 0.31
TUBA4AP68366 AL353807.1-201ENST00000427475 662 ntBASIC16.98■□□□□ 0.31
TUBA4AP68366 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.98■□□□□ 0.31
TUBA4AP68366 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA4AP68366 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.98■□□□□ 0.31
TUBA4AP68366 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA4AP68366 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.98■□□□□ 0.31
TUBA4AP68366 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.98■□□□□ 0.31
TUBA4AP68366 HLA-A-209ENST00000638375 975 ntBASIC16.98■□□□□ 0.31
TUBA4AP68366 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
TUBA4AP68366 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA4AP68366 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA4AP68366 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA4AP68366 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA4AP68366 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TUBA4AP68366 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA4AP68366 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA4AP68366 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA4AP68366 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TUBA4AP68366 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TUBA4AP68366 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
TUBA4AP68366 PCDHB19P-201ENST00000570871 2371 ntBASIC16.97■□□□□ 0.31
TUBA4AP68366 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TUBA4AP68366 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.97■□□□□ 0.31
TUBA4AP68366 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TUBA4AP68366 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA4AP68366 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TUBA4AP68366 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA4AP68366 AC112777.1-201ENST00000540175 1423 ntBASIC16.97■□□□□ 0.31
TUBA4AP68366 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA4AP68366 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TUBA4AP68366 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TUBA4AP68366 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TUBA4AP68366 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA4AP68366 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TUBA4AP68366 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TUBA4AP68366 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA4AP68366 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TUBA4AP68366 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA4AP68366 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.97■□□□□ 0.31
TUBA4AP68366 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.97■□□□□ 0.31
TUBA4AP68366 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.97■□□□□ 0.31
TUBA4AP68366 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.97■□□□□ 0.31
TUBA4AP68366 CD177P1-201ENST00000606252 935 ntBASIC16.97■□□□□ 0.31
TUBA4AP68366 AC073195.1-201ENST00000607241 877 ntBASIC16.97■□□□□ 0.31
TUBA4AP68366 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.97■□□□□ 0.31
TUBA4AP68366 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.97■□□□□ 0.31
TUBA4AP68366 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA4AP68366 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TUBA4AP68366 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA4AP68366 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA4AP68366 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.97■□□□□ 0.31
TUBA4AP68366 AC008556.1-201ENST00000610908 2040 ntBASIC16.97■□□□□ 0.31
TUBA4AP68366 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.97■□□□□ 0.31
TUBA4AP68366 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
TUBA4AP68366 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA4AP68366 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA4AP68366 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA4AP68366 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA4AP68366 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBA4AP68366 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TUBA4AP68366 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.96■□□□□ 0.31
TUBA4AP68366 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA4AP68366 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA4AP68366 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
TUBA4AP68366 MTMR9LP-203ENST00000426597 1545 ntBASIC16.96■□□□□ 0.31
TUBA4AP68366 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA4AP68366 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA4AP68366 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.96■□□□□ 0.31
TUBA4AP68366 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA4AP68366 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA4AP68366 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA4AP68366 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA4AP68366 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA4AP68366 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.96■□□□□ 0.31
TUBA4AP68366 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.96■□□□□ 0.31
TUBA4AP68366 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.96■□□□□ 0.31
TUBA4AP68366 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.96■□□□□ 0.31
TUBA4AP68366 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.96■□□□□ 0.31
TUBA4AP68366 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.96■□□□□ 0.31
TUBA4AP68366 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.96■□□□□ 0.31
TUBA4AP68366 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA4AP68366 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA4AP68366 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA4AP68366 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBA4AP68366 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TUBA4AP68366 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms