Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNRPFP62306 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SNRPFP62306 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNRPFP62306 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNRPFP62306 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNRPFP62306 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.62■□□□□ 0.73
SNRPFP62306 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNRPFP62306 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.62■□□□□ 0.73
SNRPFP62306 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNRPFP62306 PCED1CP-201ENST00000419887 785 ntBASIC19.62■□□□□ 0.73
SNRPFP62306 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.62■□□□□ 0.73
SNRPFP62306 KRT18P35-201ENST00000510488 1269 ntBASIC19.62■□□□□ 0.73
SNRPFP62306 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.62■□□□□ 0.73
SNRPFP62306 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.62■□□□□ 0.73
SNRPFP62306 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNRPFP62306 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.62■□□□□ 0.73
SNRPFP62306 AL121672.3-201ENST00000608644 468 ntBASIC19.62■□□□□ 0.73
SNRPFP62306 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.62■□□□□ 0.73
SNRPFP62306 RNF165-205ENST00000588679 2904 ntBASIC19.62■□□□□ 0.73
SNRPFP62306 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNRPFP62306 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNRPFP62306 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNRPFP62306 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.62■□□□□ 0.73
SNRPFP62306 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNRPFP62306 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SNRPFP62306 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNRPFP62306 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
SNRPFP62306 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.61■□□□□ 0.73
SNRPFP62306 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNRPFP62306 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNRPFP62306 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.61■□□□□ 0.73
SNRPFP62306 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNRPFP62306 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.61■□□□□ 0.73
SNRPFP62306 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNRPFP62306 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.61■□□□□ 0.73
SNRPFP62306 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNRPFP62306 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNRPFP62306 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNRPFP62306 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNRPFP62306 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNRPFP62306 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.61■□□□□ 0.73
SNRPFP62306 MIR1224-201ENST00000408193 85 ntBASIC19.61■□□□□ 0.73
SNRPFP62306 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.61■□□□□ 0.73
SNRPFP62306 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.61■□□□□ 0.73
SNRPFP62306 DDX43P3-201ENST00000441064 443 ntBASIC19.61■□□□□ 0.73
SNRPFP62306 BX276092.5-203ENST00000456199 560 ntBASIC19.61■□□□□ 0.73
SNRPFP62306 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SNRPFP62306 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.61■□□□□ 0.73
SNRPFP62306 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.61■□□□□ 0.73
SNRPFP62306 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.61■□□□□ 0.73
SNRPFP62306 AC010331.1-201ENST00000611423 582 ntBASIC19.61■□□□□ 0.73
SNRPFP62306 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.61■□□□□ 0.73
SNRPFP62306 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNRPFP62306 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNRPFP62306 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.61■□□□□ 0.73
SNRPFP62306 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNRPFP62306 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SNRPFP62306 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SNRPFP62306 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
SNRPFP62306 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNRPFP62306 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.6■□□□□ 0.73
SNRPFP62306 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNRPFP62306 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNRPFP62306 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNRPFP62306 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNRPFP62306 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNRPFP62306 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNRPFP62306 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SNRPFP62306 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNRPFP62306 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNRPFP62306 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.6■□□□□ 0.73
SNRPFP62306 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNRPFP62306 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNRPFP62306 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.6■□□□□ 0.73
SNRPFP62306 AP000550.4-202ENST00000639755 178 ntBASIC19.6■□□□□ 0.73
SNRPFP62306 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNRPFP62306 AC006116.8-202ENST00000587620 1550 ntBASIC19.6■□□□□ 0.73
SNRPFP62306 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.6■□□□□ 0.73
SNRPFP62306 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SNRPFP62306 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNRPFP62306 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNRPFP62306 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNRPFP62306 IER3-202ENST00000376377 1350 ntBASIC19.59■□□□□ 0.73
SNRPFP62306 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SNRPFP62306 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
SNRPFP62306 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SNRPFP62306 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SNRPFP62306 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.59■□□□□ 0.73
SNRPFP62306 AC097374.2-201ENST00000618617 1306 ntBASIC19.59■□□□□ 0.73
SNRPFP62306 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SNRPFP62306 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNRPFP62306 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNRPFP62306 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNRPFP62306 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNRPFP62306 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNRPFP62306 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNRPFP62306 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNRPFP62306 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.59■□□□□ 0.73
SNRPFP62306 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNRPFP62306 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms