Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 HCG4P8-203ENST00000443049 980 ntBASIC19.88■□□□□ 0.77
PEX3P56589 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.88■□□□□ 0.77
PEX3P56589 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.88■□□□□ 0.77
PEX3P56589 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.88■□□□□ 0.77
PEX3P56589 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.88■□□□□ 0.77
PEX3P56589 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PEX3P56589 AC092329.2-201ENST00000598402 547 ntBASIC19.88■□□□□ 0.77
PEX3P56589 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
PEX3P56589 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PEX3P56589 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PEX3P56589 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PEX3P56589 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.88■□□□□ 0.77
PEX3P56589 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PEX3P56589 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PEX3P56589 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PEX3P56589 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PEX3P56589 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PEX3P56589 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PEX3P56589 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.87■□□□□ 0.77
PEX3P56589 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.87■□□□□ 0.77
PEX3P56589 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PEX3P56589 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.87■□□□□ 0.77
PEX3P56589 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PEX3P56589 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PEX3P56589 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.87■□□□□ 0.77
PEX3P56589 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PEX3P56589 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PEX3P56589 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.87■□□□□ 0.77
PEX3P56589 AL845331.1-201ENST00000424978 1190 ntBASIC19.87■□□□□ 0.77
PEX3P56589 MTCL1P1-201ENST00000446207 792 ntBASIC19.87■□□□□ 0.77
PEX3P56589 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PEX3P56589 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
PEX3P56589 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PEX3P56589 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PEX3P56589 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PEX3P56589 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PEX3P56589 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PEX3P56589 AP000997.3-201ENST00000623333 2250 ntBASIC19.87■□□□□ 0.77
PEX3P56589 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.87■□□□□ 0.77
PEX3P56589 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.87■□□□□ 0.77
PEX3P56589 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PEX3P56589 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.86■□□□□ 0.77
PEX3P56589 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.86■□□□□ 0.77
PEX3P56589 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PEX3P56589 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PEX3P56589 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
PEX3P56589 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PEX3P56589 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.86■□□□□ 0.77
PEX3P56589 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PEX3P56589 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PEX3P56589 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PEX3P56589 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PEX3P56589 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.86■□□□□ 0.77
PEX3P56589 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PEX3P56589 LINC00265-3P-201ENST00000447588 903 ntBASIC19.86■□□□□ 0.77
PEX3P56589 TOB2P1-201ENST00000469761 992 ntBASIC19.86■□□□□ 0.77
PEX3P56589 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.86■□□□□ 0.77
PEX3P56589 DUTP2-201ENST00000519164 463 ntBASIC19.86■□□□□ 0.77
PEX3P56589 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.86■□□□□ 0.77
PEX3P56589 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.86■□□□□ 0.77
PEX3P56589 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PEX3P56589 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.86■□□□□ 0.77
PEX3P56589 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PEX3P56589 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PEX3P56589 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.86■□□□□ 0.77
PEX3P56589 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PEX3P56589 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PEX3P56589 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PEX3P56589 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PEX3P56589 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
PEX3P56589 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PEX3P56589 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PEX3P56589 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PEX3P56589 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PEX3P56589 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PEX3P56589 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.85■□□□□ 0.77
PEX3P56589 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PEX3P56589 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
PEX3P56589 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PEX3P56589 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.85■□□□□ 0.77
PEX3P56589 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PEX3P56589 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PEX3P56589 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PEX3P56589 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PEX3P56589 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PEX3P56589 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PEX3P56589 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PEX3P56589 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PEX3P56589 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PEX3P56589 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.85■□□□□ 0.77
PEX3P56589 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
PEX3P56589 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.85■□□□□ 0.77
PEX3P56589 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
PEX3P56589 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PEX3P56589 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PEX3P56589 AC091607.1-201ENST00000490318 1060 ntBASIC19.85■□□□□ 0.77
PEX3P56589 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.85■□□□□ 0.77
PEX3P56589 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.85■□□□□ 0.77
PEX3P56589 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PEX3P56589 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms