Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRIM2P49643 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PRIM2P49643 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRIM2P49643 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRIM2P49643 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PRIM2P49643 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PRIM2P49643 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PRIM2P49643 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.2■□□□□ 0.34
PRIM2P49643 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRIM2P49643 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRIM2P49643 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.2■□□□□ 0.34
PRIM2P49643 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.2■□□□□ 0.34
PRIM2P49643 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRIM2P49643 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.2■□□□□ 0.34
PRIM2P49643 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.2■□□□□ 0.34
PRIM2P49643 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
PRIM2P49643 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRIM2P49643 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRIM2P49643 AL163051.1-201ENST00000569214 1512 ntBASIC17.2■□□□□ 0.34
PRIM2P49643 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRIM2P49643 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRIM2P49643 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PRIM2P49643 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PRIM2P49643 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.2■□□□□ 0.34
PRIM2P49643 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRIM2P49643 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRIM2P49643 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRIM2P49643 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRIM2P49643 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.19■□□□□ 0.34
PRIM2P49643 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRIM2P49643 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRIM2P49643 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRIM2P49643 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PRIM2P49643 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRIM2P49643 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.19■□□□□ 0.34
PRIM2P49643 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRIM2P49643 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRIM2P49643 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRIM2P49643 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRIM2P49643 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PRIM2P49643 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
PRIM2P49643 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRIM2P49643 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PRIM2P49643 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.19■□□□□ 0.34
PRIM2P49643 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.19■□□□□ 0.34
PRIM2P49643 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRIM2P49643 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.19■□□□□ 0.34
PRIM2P49643 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.19■□□□□ 0.34
PRIM2P49643 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
PRIM2P49643 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.19■□□□□ 0.34
PRIM2P49643 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.19■□□□□ 0.34
PRIM2P49643 AC112497.1-201ENST00000624824 639 ntBASIC17.19■□□□□ 0.34
PRIM2P49643 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRIM2P49643 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.19■□□□□ 0.34
PRIM2P49643 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRIM2P49643 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRIM2P49643 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.19■□□□□ 0.34
PRIM2P49643 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRIM2P49643 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRIM2P49643 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.19■□□□□ 0.34
PRIM2P49643 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRIM2P49643 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.19■□□□□ 0.34
PRIM2P49643 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PRIM2P49643 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRIM2P49643 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRIM2P49643 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PRIM2P49643 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRIM2P49643 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRIM2P49643 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.18■□□□□ 0.34
PRIM2P49643 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.18■□□□□ 0.34
PRIM2P49643 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRIM2P49643 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PRIM2P49643 PHGDH-209ENST00000641074 1780 ntBASIC17.18■□□□□ 0.34
PRIM2P49643 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PRIM2P49643 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRIM2P49643 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRIM2P49643 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PRIM2P49643 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRIM2P49643 INGX-201ENST00000359239 846 ntBASIC17.18■□□□□ 0.34
PRIM2P49643 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRIM2P49643 MIR149-201ENST00000384879 89 ntBASIC17.18■□□□□ 0.34
PRIM2P49643 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRIM2P49643 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.18■□□□□ 0.34
PRIM2P49643 HMGA1P5-201ENST00000412453 271 ntBASIC17.18■□□□□ 0.34
PRIM2P49643 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
PRIM2P49643 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.18■□□□□ 0.34
PRIM2P49643 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRIM2P49643 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.18■□□□□ 0.34
PRIM2P49643 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRIM2P49643 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.18■□□□□ 0.34
PRIM2P49643 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRIM2P49643 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.18■□□□□ 0.34
PRIM2P49643 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRIM2P49643 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRIM2P49643 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRIM2P49643 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.18■□□□□ 0.34
PRIM2P49643 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.18■□□□□ 0.34
PRIM2P49643 AC009102.3-201ENST00000623118 1491 ntBASIC17.18■□□□□ 0.34
PRIM2P49643 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.18■□□□□ 0.34
PRIM2P49643 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms