Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.3■□□□□ 0.52
HADHAP40939 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
HADHAP40939 AL157888.1-201ENST00000631930 593 ntBASIC18.3■□□□□ 0.52
HADHAP40939 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHAP40939 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHAP40939 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHAP40939 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
HADHAP40939 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HADHAP40939 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.3■□□□□ 0.52
HADHAP40939 AC134043.2-201ENST00000624206 2238 ntBASIC18.3■□□□□ 0.52
HADHAP40939 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
HADHAP40939 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHAP40939 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HADHAP40939 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHAP40939 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HADHAP40939 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HADHAP40939 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HADHAP40939 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.3■□□□□ 0.52
HADHAP40939 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.3■□□□□ 0.52
HADHAP40939 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HADHAP40939 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HADHAP40939 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
HADHAP40939 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
HADHAP40939 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.29■□□□□ 0.52
HADHAP40939 AP000997.3-201ENST00000623333 2250 ntBASIC18.29■□□□□ 0.52
HADHAP40939 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HADHAP40939 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HADHAP40939 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.29■□□□□ 0.52
HADHAP40939 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HADHAP40939 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HADHAP40939 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.29■□□□□ 0.52
HADHAP40939 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HADHAP40939 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HADHAP40939 TMPOP1-202ENST00000424642 1267 ntBASIC18.29■□□□□ 0.52
HADHAP40939 AC117947.1-201ENST00000427448 529 ntBASIC18.29■□□□□ 0.52
HADHAP40939 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.29■□□□□ 0.52
HADHAP40939 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
HADHAP40939 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.29■□□□□ 0.52
HADHAP40939 AC011558.1-201ENST00000623459 338 ntBASIC18.29■□□□□ 0.52
HADHAP40939 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HADHAP40939 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.29■□□□□ 0.52
HADHAP40939 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.29■□□□□ 0.52
HADHAP40939 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HADHAP40939 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
HADHAP40939 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HADHAP40939 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HADHAP40939 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HADHAP40939 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HADHAP40939 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.29■□□□□ 0.52
HADHAP40939 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.29■□□□□ 0.52
HADHAP40939 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.29■□□□□ 0.52
HADHAP40939 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.29■□□□□ 0.52
HADHAP40939 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HADHAP40939 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HADHAP40939 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HADHAP40939 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HADHAP40939 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HADHAP40939 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HADHAP40939 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HADHAP40939 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HADHAP40939 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HADHAP40939 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
HADHAP40939 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HADHAP40939 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.28■□□□□ 0.52
HADHAP40939 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
HADHAP40939 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HADHAP40939 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HADHAP40939 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HADHAP40939 PHGDH-209ENST00000641074 1780 ntBASIC18.28■□□□□ 0.52
HADHAP40939 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HADHAP40939 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.28■□□□□ 0.52
HADHAP40939 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.28■□□□□ 0.52
HADHAP40939 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HADHAP40939 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HADHAP40939 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HADHAP40939 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HADHAP40939 RNF152P1-201ENST00000397754 604 ntBASIC18.28■□□□□ 0.52
HADHAP40939 STARP1-201ENST00000397973 869 ntBASIC18.28■□□□□ 0.52
HADHAP40939 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HADHAP40939 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.28■□□□□ 0.52
HADHAP40939 RASA4DP-201ENST00000460726 1199 ntBASIC18.28■□□□□ 0.52
HADHAP40939 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HADHAP40939 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.28■□□□□ 0.52
HADHAP40939 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.28■□□□□ 0.52
HADHAP40939 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
HADHAP40939 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.28■□□□□ 0.52
HADHAP40939 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HADHAP40939 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
HADHAP40939 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HADHAP40939 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.28■□□□□ 0.52
HADHAP40939 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.28■□□□□ 0.52
HADHAP40939 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HADHAP40939 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
HADHAP40939 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HADHAP40939 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
HADHAP40939 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HADHAP40939 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HADHAP40939 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HADHAP40939 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.28■□□□□ 0.52
HADHAP40939 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms