Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC3P40938 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFC3P40938 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC3P40938 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC3P40938 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC3P40938 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.53■□□□□ 0.24
RFC3P40938 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFC3P40938 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.53■□□□□ 0.24
RFC3P40938 MINOS1P3-201ENST00000457048 203 ntBASIC16.53■□□□□ 0.24
RFC3P40938 VENTXP7-201ENST00000475503 772 ntBASIC16.53■□□□□ 0.24
RFC3P40938 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.53■□□□□ 0.24
RFC3P40938 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFC3P40938 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC3P40938 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.53■□□□□ 0.24
RFC3P40938 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.53■□□□□ 0.24
RFC3P40938 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.53■□□□□ 0.24
RFC3P40938 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.53■□□□□ 0.24
RFC3P40938 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFC3P40938 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.53■□□□□ 0.24
RFC3P40938 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.53■□□□□ 0.24
RFC3P40938 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RFC3P40938 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFC3P40938 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC3P40938 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC3P40938 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC3P40938 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFC3P40938 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
RFC3P40938 HTR7P1-202ENST00000624664 4411 ntBASIC16.52■□□□□ 0.24
RFC3P40938 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC3P40938 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC3P40938 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC3P40938 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.52■□□□□ 0.24
RFC3P40938 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC3P40938 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC3P40938 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.52■□□□□ 0.24
RFC3P40938 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC3P40938 LINC00602-201ENST00000629776 2065 ntBASIC16.52■□□□□ 0.24
RFC3P40938 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.52■□□□□ 0.24
RFC3P40938 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RFC3P40938 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC3P40938 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFC3P40938 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
RFC3P40938 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
RFC3P40938 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
RFC3P40938 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RFC3P40938 IGHV3-47-201ENST00000425060 335 ntBASIC16.52■□□□□ 0.24
RFC3P40938 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.52■□□□□ 0.24
RFC3P40938 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.52■□□□□ 0.24
RFC3P40938 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.52■□□□□ 0.24
RFC3P40938 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.52■□□□□ 0.24
RFC3P40938 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RFC3P40938 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RFC3P40938 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RFC3P40938 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RFC3P40938 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RFC3P40938 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RFC3P40938 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
RFC3P40938 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RFC3P40938 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RFC3P40938 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.52■□□□□ 0.23
RFC3P40938 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RFC3P40938 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.52■□□□□ 0.23
RFC3P40938 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.52■□□□□ 0.23
RFC3P40938 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RFC3P40938 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RFC3P40938 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RFC3P40938 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC3P40938 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFC3P40938 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC3P40938 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC3P40938 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.51■□□□□ 0.23
RFC3P40938 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
RFC3P40938 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC3P40938 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFC3P40938 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC3P40938 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC3P40938 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RFC3P40938 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.51■□□□□ 0.23
RFC3P40938 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC3P40938 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFC3P40938 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC3P40938 TSPY12P-201ENST00000421279 868 ntBASIC16.51■□□□□ 0.23
RFC3P40938 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.51■□□□□ 0.23
RFC3P40938 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC3P40938 LINC01711-201ENST00000598340 967 ntBASIC16.51■□□□□ 0.23
RFC3P40938 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC3P40938 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC3P40938 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.51■□□□□ 0.23
RFC3P40938 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC3P40938 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFC3P40938 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFC3P40938 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RFC3P40938 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFC3P40938 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.51■□□□□ 0.23
RFC3P40938 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFC3P40938 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFC3P40938 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFC3P40938 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.5■□□□□ 0.23
RFC3P40938 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFC3P40938 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms