Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN7P35236 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN7P35236 SIRPAP1-201ENST00000448467 1770 ntBASIC18.68■□□□□ 0.58
PTPN7P35236 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN7P35236 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN7P35236 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN7P35236 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN7P35236 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.68■□□□□ 0.58
PTPN7P35236 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN7P35236 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PTPN7P35236 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PTPN7P35236 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN7P35236 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.68■□□□□ 0.58
PTPN7P35236 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.68■□□□□ 0.58
PTPN7P35236 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.68■□□□□ 0.58
PTPN7P35236 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.68■□□□□ 0.58
PTPN7P35236 AC141257.4-201ENST00000634557 245 ntBASIC18.68■□□□□ 0.58
PTPN7P35236 AC136944.6-201ENST00000634818 245 ntBASIC18.68■□□□□ 0.58
PTPN7P35236 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.68■□□□□ 0.58
PTPN7P35236 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN7P35236 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN7P35236 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN7P35236 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
PTPN7P35236 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN7P35236 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.68■□□□□ 0.58
PTPN7P35236 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.68■□□□□ 0.58
PTPN7P35236 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTPN7P35236 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN7P35236 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.67■□□□□ 0.58
PTPN7P35236 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN7P35236 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PTPN7P35236 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN7P35236 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.67■□□□□ 0.58
PTPN7P35236 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN7P35236 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN7P35236 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PTPN7P35236 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN7P35236 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.67■□□□□ 0.58
PTPN7P35236 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.67■□□□□ 0.58
PTPN7P35236 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN7P35236 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.67■□□□□ 0.58
PTPN7P35236 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.67■□□□□ 0.58
PTPN7P35236 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.67■□□□□ 0.58
PTPN7P35236 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.67■□□□□ 0.58
PTPN7P35236 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.67■□□□□ 0.58
PTPN7P35236 AC145285.6-201ENST00000604632 637 ntBASIC18.67■□□□□ 0.58
PTPN7P35236 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.67■□□□□ 0.58
PTPN7P35236 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
PTPN7P35236 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN7P35236 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.67■□□□□ 0.58
PTPN7P35236 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN7P35236 AL645608.8-201ENST00000606034 2086 ntBASIC18.67■□□□□ 0.58
PTPN7P35236 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.67■□□□□ 0.58
PTPN7P35236 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PTPN7P35236 HTR7P1-202ENST00000624664 4411 ntBASIC18.67■□□□□ 0.58
PTPN7P35236 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.67■□□□□ 0.58
PTPN7P35236 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN7P35236 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.66■□□□□ 0.58
PTPN7P35236 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN7P35236 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN7P35236 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.66■□□□□ 0.58
PTPN7P35236 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.66■□□□□ 0.58
PTPN7P35236 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PTPN7P35236 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN7P35236 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN7P35236 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN7P35236 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN7P35236 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN7P35236 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN7P35236 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN7P35236 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN7P35236 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN7P35236 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN7P35236 AL596275.1-201ENST00000423464 877 ntBASIC18.66■□□□□ 0.58
PTPN7P35236 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
PTPN7P35236 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN7P35236 AC034232.1-201ENST00000506026 1064 ntBASIC18.66■□□□□ 0.58
PTPN7P35236 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN7P35236 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.66■□□□□ 0.58
PTPN7P35236 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.66■□□□□ 0.58
PTPN7P35236 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.66■□□□□ 0.58
PTPN7P35236 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN7P35236 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN7P35236 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN7P35236 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN7P35236 AC133963.1-201ENST00000504166 1679 ntBASIC18.66■□□□□ 0.58
PTPN7P35236 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN7P35236 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN7P35236 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN7P35236 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPN7P35236 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.66■□□□□ 0.58
PTPN7P35236 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.66■□□□□ 0.58
PTPN7P35236 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.65■□□□□ 0.58
PTPN7P35236 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN7P35236 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN7P35236 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PTPN7P35236 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN7P35236 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN7P35236 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPN7P35236 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms