Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.16■□□□□ 0.34
MMP11P24347 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP11P24347 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP11P24347 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MMP11P24347 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.16■□□□□ 0.34
MMP11P24347 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP11P24347 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
MMP11P24347 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP11P24347 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
MMP11P24347 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.16■□□□□ 0.34
MMP11P24347 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP11P24347 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.16■□□□□ 0.34
MMP11P24347 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.16■□□□□ 0.34
MMP11P24347 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.16■□□□□ 0.34
MMP11P24347 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.16■□□□□ 0.34
MMP11P24347 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.16■□□□□ 0.34
MMP11P24347 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.16■□□□□ 0.34
MMP11P24347 IGHV3-41-201ENST00000613121 348 ntBASIC17.16■□□□□ 0.34
MMP11P24347 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.16■□□□□ 0.34
MMP11P24347 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP11P24347 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
MMP11P24347 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
MMP11P24347 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP11P24347 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP11P24347 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP11P24347 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP11P24347 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.16■□□□□ 0.34
MMP11P24347 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
MMP11P24347 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.15■□□□□ 0.34
MMP11P24347 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MMP11P24347 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP11P24347 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.15■□□□□ 0.34
MMP11P24347 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.15■□□□□ 0.34
MMP11P24347 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.15■□□□□ 0.34
MMP11P24347 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
MMP11P24347 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MMP11P24347 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
MMP11P24347 LINC00265-3P-201ENST00000447588 903 ntBASIC17.15■□□□□ 0.34
MMP11P24347 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP11P24347 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.15■□□□□ 0.34
MMP11P24347 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
MMP11P24347 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.15■□□□□ 0.34
MMP11P24347 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP11P24347 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MMP11P24347 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
MMP11P24347 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP11P24347 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP11P24347 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP11P24347 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MMP11P24347 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MMP11P24347 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MMP11P24347 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP11P24347 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
MMP11P24347 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP11P24347 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
MMP11P24347 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MMP11P24347 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
MMP11P24347 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
MMP11P24347 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MMP11P24347 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.14■□□□□ 0.33
MMP11P24347 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.14■□□□□ 0.33
MMP11P24347 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP11P24347 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.14■□□□□ 0.33
MMP11P24347 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP11P24347 MIR149-201ENST00000384879 89 ntBASIC17.14■□□□□ 0.33
MMP11P24347 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.14■□□□□ 0.33
MMP11P24347 TOB2P1-201ENST00000469761 992 ntBASIC17.14■□□□□ 0.33
MMP11P24347 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MMP11P24347 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP11P24347 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP11P24347 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MMP11P24347 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
MMP11P24347 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP11P24347 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MMP11P24347 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
MMP11P24347 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.14■□□□□ 0.33
MMP11P24347 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP11P24347 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP11P24347 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MMP11P24347 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
MMP11P24347 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP11P24347 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP11P24347 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP11P24347 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
MMP11P24347 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
MMP11P24347 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MMP11P24347 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MMP11P24347 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.13■□□□□ 0.33
MMP11P24347 GUSBP12-201ENST00000513727 720 ntBASIC17.13■□□□□ 0.33
MMP11P24347 AP000867.3-201ENST00000524675 377 ntBASIC17.13■□□□□ 0.33
MMP11P24347 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.13■□□□□ 0.33
MMP11P24347 AC012615.1-201ENST00000565797 1299 ntBASIC17.13■□□□□ 0.33
MMP11P24347 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.13■□□□□ 0.33
MMP11P24347 AC008687.5-201ENST00000593746 558 ntBASIC17.13■□□□□ 0.33
MMP11P24347 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP11P24347 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.13■□□□□ 0.33
MMP11P24347 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.13■□□□□ 0.33
MMP11P24347 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP11P24347 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.13■□□□□ 0.33
MMP11P24347 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms