Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH3P22223 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CDH3P22223 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH3P22223 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CDH3P22223 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
CDH3P22223 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH3P22223 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.71■□□□□ 0.43
CDH3P22223 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH3P22223 HTR7P1-202ENST00000624664 4411 ntBASIC17.71■□□□□ 0.43
CDH3P22223 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH3P22223 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH3P22223 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH3P22223 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH3P22223 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH3P22223 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CDH3P22223 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.71■□□□□ 0.43
CDH3P22223 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH3P22223 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH3P22223 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH3P22223 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH3P22223 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.71■□□□□ 0.42
CDH3P22223 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CDH3P22223 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.71■□□□□ 0.42
CDH3P22223 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH3P22223 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH3P22223 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH3P22223 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH3P22223 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH3P22223 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH3P22223 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH3P22223 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH3P22223 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH3P22223 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH3P22223 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDH3P22223 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH3P22223 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH3P22223 MIR662-201ENST00000384847 95 ntBASIC17.7■□□□□ 0.42
CDH3P22223 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH3P22223 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDH3P22223 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.7■□□□□ 0.42
CDH3P22223 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH3P22223 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH3P22223 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
CDH3P22223 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH3P22223 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CDH3P22223 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.7■□□□□ 0.42
CDH3P22223 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDH3P22223 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH3P22223 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH3P22223 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH3P22223 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.7■□□□□ 0.42
CDH3P22223 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.7■□□□□ 0.42
CDH3P22223 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH3P22223 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH3P22223 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH3P22223 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH3P22223 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH3P22223 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.69■□□□□ 0.42
CDH3P22223 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CDH3P22223 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH3P22223 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH3P22223 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH3P22223 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CDH3P22223 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CDH3P22223 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH3P22223 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH3P22223 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.69■□□□□ 0.42
CDH3P22223 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH3P22223 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.69■□□□□ 0.42
CDH3P22223 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.69■□□□□ 0.42
CDH3P22223 AC011498.5-201ENST00000592027 486 ntBASIC17.69■□□□□ 0.42
CDH3P22223 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CDH3P22223 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.69■□□□□ 0.42
CDH3P22223 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.69■□□□□ 0.42
CDH3P22223 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CDH3P22223 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.69■□□□□ 0.42
CDH3P22223 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH3P22223 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CDH3P22223 MYLKP1-201ENST00000509077 1580 ntBASIC17.69■□□□□ 0.42
CDH3P22223 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CDH3P22223 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.69■□□□□ 0.42
CDH3P22223 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH3P22223 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH3P22223 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH3P22223 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CDH3P22223 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH3P22223 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
CDH3P22223 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH3P22223 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH3P22223 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH3P22223 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH3P22223 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH3P22223 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH3P22223 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH3P22223 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH3P22223 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH3P22223 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CDH3P22223 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH3P22223 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CDH3P22223 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms