Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RAB5AP20339 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RAB5AP20339 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB5AP20339 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB5AP20339 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
RAB5AP20339 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB5AP20339 AC087633.2-202ENST00000565166 1439 ntBASIC14.06□□□□□ -0.16
RAB5AP20339 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB5AP20339 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5AP20339 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.05□□□□□ -0.16
RAB5AP20339 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5AP20339 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5AP20339 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5AP20339 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
RAB5AP20339 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RAB5AP20339 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5AP20339 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5AP20339 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5AP20339 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.05□□□□□ -0.16
RAB5AP20339 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5AP20339 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5AP20339 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5AP20339 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.05□□□□□ -0.16
RAB5AP20339 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5AP20339 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5AP20339 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
RAB5AP20339 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.05□□□□□ -0.16
RAB5AP20339 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5AP20339 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5AP20339 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
RAB5AP20339 MIR572-201ENST00000384983 95 ntBASIC14.05□□□□□ -0.16
RAB5AP20339 AC105265.2-201ENST00000467189 838 ntBASIC14.05□□□□□ -0.16
RAB5AP20339 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC14.05□□□□□ -0.16
RAB5AP20339 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5AP20339 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5AP20339 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5AP20339 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
RAB5AP20339 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5AP20339 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5AP20339 CYP2T1P-202ENST00000641596 2535 ntBASIC14.05□□□□□ -0.16
RAB5AP20339 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5AP20339 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
RAB5AP20339 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RAB5AP20339 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5AP20339 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5AP20339 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5AP20339 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.05□□□□□ -0.16
RAB5AP20339 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5AP20339 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5AP20339 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RAB5AP20339 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
RAB5AP20339 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5AP20339 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5AP20339 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5AP20339 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5AP20339 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB5AP20339 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5AP20339 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RAB5AP20339 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5AP20339 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5AP20339 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
RAB5AP20339 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB5AP20339 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB5AP20339 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.04□□□□□ -0.16
RAB5AP20339 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5AP20339 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB5AP20339 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
RAB5AP20339 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5AP20339 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5AP20339 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5AP20339 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB5AP20339 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB5AP20339 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5AP20339 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC14.04□□□□□ -0.16
RAB5AP20339 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RAB5AP20339 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5AP20339 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB5AP20339 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5AP20339 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5AP20339 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5AP20339 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5AP20339 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5AP20339 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5AP20339 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5AP20339 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5AP20339 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5AP20339 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5AP20339 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB5AP20339 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB5AP20339 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB5AP20339 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
RAB5AP20339 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5AP20339 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5AP20339 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5AP20339 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5AP20339 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB5AP20339 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB5AP20339 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
RAB5AP20339 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RAB5AP20339 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms