Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC130P13994 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC130P13994 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC130P13994 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC130P13994 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC130P13994 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC130P13994 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC130P13994 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC130P13994 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCDC130P13994 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC130P13994 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC130P13994 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC130P13994 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC130P13994 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC130P13994 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC130P13994 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC130P13994 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CCDC130P13994 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC130P13994 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC130P13994 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC130P13994 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC130P13994 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC130P13994 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC130P13994 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC130P13994 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC130P13994 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC130P13994 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC130P13994 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CCDC130P13994 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC130P13994 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC130P13994 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC130P13994 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC130P13994 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC130P13994 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC130P13994 AP000867.3-201ENST00000524675 377 ntBASIC19.1■□□□□ 0.65
CCDC130P13994 AP005901.3-202ENST00000581653 237 ntBASIC19.1■□□□□ 0.65
CCDC130P13994 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC130P13994 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.1■□□□□ 0.65
CCDC130P13994 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.1■□□□□ 0.65
CCDC130P13994 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.1■□□□□ 0.65
CCDC130P13994 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC130P13994 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC130P13994 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC130P13994 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCDC130P13994 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC130P13994 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC130P13994 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC130P13994 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC130P13994 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC130P13994 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC130P13994 AC233702.3-201ENST00000578656 1387 ntBASIC19.09■□□□□ 0.65
CCDC130P13994 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CCDC130P13994 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC130P13994 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC130P13994 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC130P13994 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC130P13994 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC130P13994 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC130P13994 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC130P13994 MTCL1P1-201ENST00000446207 792 ntBASIC19.09■□□□□ 0.65
CCDC130P13994 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CCDC130P13994 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC130P13994 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC130P13994 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC130P13994 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC130P13994 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC130P13994 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.09■□□□□ 0.65
CCDC130P13994 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC130P13994 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC130P13994 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC130P13994 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC130P13994 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC130P13994 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC130P13994 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
CCDC130P13994 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC130P13994 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC130P13994 AC135050.7-201ENST00000624508 2218 ntBASIC19.09■□□□□ 0.65
CCDC130P13994 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC130P13994 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC130P13994 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CCDC130P13994 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC130P13994 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC130P13994 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
CCDC130P13994 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC130P13994 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CCDC130P13994 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC130P13994 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.09■□□□□ 0.65
CCDC130P13994 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC130P13994 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC130P13994 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC130P13994 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC130P13994 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC130P13994 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC130P13994 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC130P13994 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC130P13994 ABALON-201ENST00000629058 1903 ntBASIC19.08■□□□□ 0.65
CCDC130P13994 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.08■□□□□ 0.65
CCDC130P13994 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC130P13994 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.08■□□□□ 0.65
CCDC130P13994 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms