Protein–RNA interactions for Protein: P0DI80

SMIM6, Small integral membrane protein 6, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM6P0DI80 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC13.61□□□□□ -0.23
SMIM6P0DI80 ZNF815P-204ENST00000434898 1737 ntBASIC13.61□□□□□ -0.23
SMIM6P0DI80 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
SMIM6P0DI80 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM6P0DI80 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM6P0DI80 STX4-202ENST00000394998 1498 ntTSL 2 BASIC13.61□□□□□ -0.23
SMIM6P0DI80 AP004607.4-201ENST00000530158 1459 ntBASIC13.61□□□□□ -0.23
SMIM6P0DI80 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM6P0DI80 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM6P0DI80 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM6P0DI80 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SMIM6P0DI80 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM6P0DI80 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM6P0DI80 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM6P0DI80 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.6□□□□□ -0.23
SMIM6P0DI80 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.6□□□□□ -0.23
SMIM6P0DI80 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM6P0DI80 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM6P0DI80 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.6□□□□□ -0.23
SMIM6P0DI80 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.6□□□□□ -0.23
SMIM6P0DI80 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM6P0DI80 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM6P0DI80 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM6P0DI80 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.6□□□□□ -0.23
SMIM6P0DI80 FEM1AP3-201ENST00000403722 1741 ntBASIC13.6□□□□□ -0.23
SMIM6P0DI80 KRT16P6-202ENST00000425692 1426 ntBASIC13.6□□□□□ -0.23
SMIM6P0DI80 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.6□□□□□ -0.23
SMIM6P0DI80 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM6P0DI80 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SMIM6P0DI80 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SMIM6P0DI80 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.6□□□□□ -0.23
SMIM6P0DI80 AC139749.1-202ENST00000617529 3139 ntBASIC13.6□□□□□ -0.23
SMIM6P0DI80 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SMIM6P0DI80 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM6P0DI80 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.6□□□□□ -0.23
SMIM6P0DI80 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SMIM6P0DI80 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM6P0DI80 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
SMIM6P0DI80 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.6□□□□□ -0.23
SMIM6P0DI80 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM6P0DI80 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
SMIM6P0DI80 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM6P0DI80 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM6P0DI80 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SMIM6P0DI80 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM6P0DI80 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
SMIM6P0DI80 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM6P0DI80 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.59□□□□□ -0.23
SMIM6P0DI80 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM6P0DI80 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
SMIM6P0DI80 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM6P0DI80 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM6P0DI80 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SMIM6P0DI80 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM6P0DI80 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM6P0DI80 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SMIM6P0DI80 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM6P0DI80 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM6P0DI80 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM6P0DI80 Z92544.1-202ENST00000571933 1220 ntBASIC13.59□□□□□ -0.23
SMIM6P0DI80 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM6P0DI80 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SMIM6P0DI80 AC079781.5-202ENST00000641784 3743 ntBASIC13.59□□□□□ -0.23
SMIM6P0DI80 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SMIM6P0DI80 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM6P0DI80 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM6P0DI80 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SMIM6P0DI80 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SMIM6P0DI80 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM6P0DI80 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC13.59□□□□□ -0.23
SMIM6P0DI80 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM6P0DI80 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM6P0DI80 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SMIM6P0DI80 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM6P0DI80 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM6P0DI80 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM6P0DI80 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM6P0DI80 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SMIM6P0DI80 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM6P0DI80 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
SMIM6P0DI80 AC004817.3-201ENST00000602957 2129 ntBASIC13.58□□□□□ -0.23
SMIM6P0DI80 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC13.58□□□□□ -0.23
SMIM6P0DI80 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM6P0DI80 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM6P0DI80 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
SMIM6P0DI80 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SMIM6P0DI80 GOLGA6L5P-202ENST00000515341 1828 ntBASIC13.58□□□□□ -0.24
SMIM6P0DI80 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM6P0DI80 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SMIM6P0DI80 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.58□□□□□ -0.24
SMIM6P0DI80 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM6P0DI80 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM6P0DI80 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC13.58□□□□□ -0.24
SMIM6P0DI80 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.58□□□□□ -0.24
SMIM6P0DI80 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM6P0DI80 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.58□□□□□ -0.24
SMIM6P0DI80 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM6P0DI80 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SMIM6P0DI80 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SMIM6P0DI80 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms