Protein–RNA interactions for Protein: P04259

KRT6B, Keratin, type II cytoskeletal 6B, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6BP04259 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6BP04259 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.53■□□□□ 0.4
KRT6BP04259 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6BP04259 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT6BP04259 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6BP04259 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6BP04259 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
KRT6BP04259 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT6BP04259 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6BP04259 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.53■□□□□ 0.4
KRT6BP04259 AP000523.1-201ENST00000398242 1049 ntBASIC17.53■□□□□ 0.4
KRT6BP04259 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6BP04259 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.53■□□□□ 0.4
KRT6BP04259 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.53■□□□□ 0.4
KRT6BP04259 FAM87A-204ENST00000613235 858 ntBASIC17.53■□□□□ 0.4
KRT6BP04259 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT6BP04259 AC092865.7-201ENST00000641832 219 ntBASIC17.53■□□□□ 0.4
KRT6BP04259 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6BP04259 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6BP04259 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6BP04259 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6BP04259 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.53■□□□□ 0.4
KRT6BP04259 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6BP04259 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6BP04259 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6BP04259 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT6BP04259 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT6BP04259 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6BP04259 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6BP04259 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6BP04259 KRT18P55-202ENST00000578578 1546 ntBASIC17.52■□□□□ 0.4
KRT6BP04259 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.52■□□□□ 0.4
KRT6BP04259 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6BP04259 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6BP04259 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.52■□□□□ 0.4
KRT6BP04259 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6BP04259 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6BP04259 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.52■□□□□ 0.4
KRT6BP04259 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.52■□□□□ 0.4
KRT6BP04259 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6BP04259 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6BP04259 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
KRT6BP04259 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6BP04259 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6BP04259 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6BP04259 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6BP04259 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6BP04259 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6BP04259 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6BP04259 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.52■□□□□ 0.4
KRT6BP04259 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6BP04259 ECEL1P2-202ENST00000465689 757 ntBASIC17.52■□□□□ 0.4
KRT6BP04259 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.52■□□□□ 0.4
KRT6BP04259 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.52■□□□□ 0.4
KRT6BP04259 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.52■□□□□ 0.4
KRT6BP04259 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.52■□□□□ 0.4
KRT6BP04259 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6BP04259 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.52■□□□□ 0.4
KRT6BP04259 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.52■□□□□ 0.4
KRT6BP04259 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6BP04259 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6BP04259 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6BP04259 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.52■□□□□ 0.4
KRT6BP04259 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KRT6BP04259 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KRT6BP04259 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KRT6BP04259 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KRT6BP04259 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.52■□□□□ 0.39
KRT6BP04259 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
KRT6BP04259 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
KRT6BP04259 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
KRT6BP04259 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KRT6BP04259 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT6BP04259 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
KRT6BP04259 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
KRT6BP04259 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.51■□□□□ 0.39
KRT6BP04259 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT6BP04259 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
KRT6BP04259 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
KRT6BP04259 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT6BP04259 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
KRT6BP04259 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT6BP04259 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT6BP04259 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
KRT6BP04259 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
KRT6BP04259 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.51■□□□□ 0.39
KRT6BP04259 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KRT6BP04259 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.51■□□□□ 0.39
KRT6BP04259 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.51■□□□□ 0.39
KRT6BP04259 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT6BP04259 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.51■□□□□ 0.39
KRT6BP04259 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.51■□□□□ 0.39
KRT6BP04259 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
KRT6BP04259 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KRT6BP04259 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
KRT6BP04259 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
KRT6BP04259 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT6BP04259 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
KRT6BP04259 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT6BP04259 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms