Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.53■□□□□ 0.4
KRT6AP02538 AP000523.1-201ENST00000398242 1049 ntBASIC17.53■□□□□ 0.4
KRT6AP02538 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6AP02538 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.53■□□□□ 0.4
KRT6AP02538 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.53■□□□□ 0.4
KRT6AP02538 FAM87A-204ENST00000613235 858 ntBASIC17.53■□□□□ 0.4
KRT6AP02538 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT6AP02538 AC092865.7-201ENST00000641832 219 ntBASIC17.53■□□□□ 0.4
KRT6AP02538 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6AP02538 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT6AP02538 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6AP02538 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6AP02538 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6AP02538 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6AP02538 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.53■□□□□ 0.4
KRT6AP02538 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6AP02538 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6AP02538 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6AP02538 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT6AP02538 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT6AP02538 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6AP02538 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6AP02538 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6AP02538 KRT18P55-202ENST00000578578 1546 ntBASIC17.52■□□□□ 0.4
KRT6AP02538 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.52■□□□□ 0.4
KRT6AP02538 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6AP02538 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.52■□□□□ 0.4
KRT6AP02538 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6AP02538 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6AP02538 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.52■□□□□ 0.4
KRT6AP02538 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.52■□□□□ 0.4
KRT6AP02538 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6AP02538 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6AP02538 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
KRT6AP02538 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6AP02538 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6AP02538 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6AP02538 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6AP02538 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6AP02538 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6AP02538 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6AP02538 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.52■□□□□ 0.4
KRT6AP02538 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6AP02538 ECEL1P2-202ENST00000465689 757 ntBASIC17.52■□□□□ 0.4
KRT6AP02538 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.52■□□□□ 0.4
KRT6AP02538 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.52■□□□□ 0.4
KRT6AP02538 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.52■□□□□ 0.4
KRT6AP02538 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.52■□□□□ 0.4
KRT6AP02538 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6AP02538 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.52■□□□□ 0.4
KRT6AP02538 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.52■□□□□ 0.4
KRT6AP02538 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6AP02538 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6AP02538 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT6AP02538 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.52■□□□□ 0.4
KRT6AP02538 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KRT6AP02538 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KRT6AP02538 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KRT6AP02538 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KRT6AP02538 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.52■□□□□ 0.39
KRT6AP02538 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
KRT6AP02538 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
KRT6AP02538 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
KRT6AP02538 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KRT6AP02538 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT6AP02538 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
KRT6AP02538 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
KRT6AP02538 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.51■□□□□ 0.39
KRT6AP02538 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT6AP02538 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
KRT6AP02538 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
KRT6AP02538 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT6AP02538 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
KRT6AP02538 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT6AP02538 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT6AP02538 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
KRT6AP02538 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
KRT6AP02538 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.51■□□□□ 0.39
KRT6AP02538 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KRT6AP02538 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.51■□□□□ 0.39
KRT6AP02538 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.51■□□□□ 0.39
KRT6AP02538 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT6AP02538 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.51■□□□□ 0.39
KRT6AP02538 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.51■□□□□ 0.39
KRT6AP02538 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
KRT6AP02538 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
KRT6AP02538 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
KRT6AP02538 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
KRT6AP02538 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT6AP02538 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
KRT6AP02538 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT6AP02538 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
KRT6AP02538 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.51■□□□□ 0.39
KRT6AP02538 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KRT6AP02538 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.5■□□□□ 0.39
KRT6AP02538 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
KRT6AP02538 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT6AP02538 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT6AP02538 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT6AP02538 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms