Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A3O75365 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
PTP4A3O75365 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A3O75365 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
PTP4A3O75365 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A3O75365 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.29■□□□□ 0.2
PTP4A3O75365 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.29■□□□□ 0.2
PTP4A3O75365 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PTP4A3O75365 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A3O75365 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A3O75365 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PTP4A3O75365 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
PTP4A3O75365 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A3O75365 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A3O75365 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.28■□□□□ 0.2
PTP4A3O75365 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A3O75365 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A3O75365 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.28■□□□□ 0.2
PTP4A3O75365 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A3O75365 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PTP4A3O75365 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A3O75365 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A3O75365 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PTP4A3O75365 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A3O75365 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.28■□□□□ 0.2
PTP4A3O75365 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A3O75365 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.28■□□□□ 0.2
PTP4A3O75365 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PTP4A3O75365 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A3O75365 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A3O75365 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.28■□□□□ 0.2
PTP4A3O75365 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.28■□□□□ 0.2
PTP4A3O75365 ECEL1P2-202ENST00000465689 757 ntBASIC16.28■□□□□ 0.2
PTP4A3O75365 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.28■□□□□ 0.2
PTP4A3O75365 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A3O75365 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
PTP4A3O75365 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PTP4A3O75365 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A3O75365 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.28■□□□□ 0.2
PTP4A3O75365 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A3O75365 AC108860.2-201ENST00000562760 2183 ntBASIC16.28■□□□□ 0.2
PTP4A3O75365 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.28■□□□□ 0.2
PTP4A3O75365 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A3O75365 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PTP4A3O75365 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.28■□□□□ 0.2
PTP4A3O75365 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A3O75365 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A3O75365 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PTP4A3O75365 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PTP4A3O75365 LINC00167-201ENST00000530583 1419 ntBASIC16.28■□□□□ 0.2
PTP4A3O75365 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.27■□□□□ 0.2
PTP4A3O75365 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTP4A3O75365 PRORSD1P-202ENST00000563365 2154 ntBASIC16.27■□□□□ 0.2
PTP4A3O75365 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTP4A3O75365 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.27■□□□□ 0.2
PTP4A3O75365 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTP4A3O75365 AC141586.5-201ENST00000624546 2050 ntBASIC16.27■□□□□ 0.2
PTP4A3O75365 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.27■□□□□ 0.2
PTP4A3O75365 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTP4A3O75365 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTP4A3O75365 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTP4A3O75365 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTP4A3O75365 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTP4A3O75365 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.27■□□□□ 0.2
PTP4A3O75365 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
PTP4A3O75365 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.27■□□□□ 0.2
PTP4A3O75365 HMGA1P5-201ENST00000412453 271 ntBASIC16.27■□□□□ 0.2
PTP4A3O75365 PVRIG2P-201ENST00000435460 978 ntBASIC16.27■□□□□ 0.2
PTP4A3O75365 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.27■□□□□ 0.2
PTP4A3O75365 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
PTP4A3O75365 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTP4A3O75365 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.27■□□□□ 0.2
PTP4A3O75365 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTP4A3O75365 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.27■□□□□ 0.2
PTP4A3O75365 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTP4A3O75365 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.27■□□□□ 0.2
PTP4A3O75365 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.27■□□□□ 0.2
PTP4A3O75365 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTP4A3O75365 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTP4A3O75365 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTP4A3O75365 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTP4A3O75365 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.19
PTP4A3O75365 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTP4A3O75365 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
PTP4A3O75365 AL355312.1-201ENST00000407115 2176 ntBASIC16.27■□□□□ 0.19
PTP4A3O75365 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.27■□□□□ 0.19
PTP4A3O75365 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PTP4A3O75365 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PTP4A3O75365 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.27■□□□□ 0.19
PTP4A3O75365 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTP4A3O75365 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PTP4A3O75365 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.26■□□□□ 0.19
PTP4A3O75365 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTP4A3O75365 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
PTP4A3O75365 AC022898.2-201ENST00000616822 1312 ntBASIC16.26■□□□□ 0.19
PTP4A3O75365 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.26■□□□□ 0.19
PTP4A3O75365 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTP4A3O75365 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.26■□□□□ 0.19
PTP4A3O75365 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTP4A3O75365 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms