Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNSO60931 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CTNSO60931 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTNSO60931 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CTNSO60931 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
CTNSO60931 UPK3BP1-201ENST00000428678 509 ntBASIC16.92■□□□□ 0.3
CTNSO60931 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTNSO60931 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTNSO60931 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.92■□□□□ 0.3
CTNSO60931 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.92■□□□□ 0.3
CTNSO60931 AC124864.1-201ENST00000623408 392 ntBASIC16.92■□□□□ 0.3
CTNSO60931 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.92■□□□□ 0.3
CTNSO60931 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNSO60931 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.92■□□□□ 0.3
CTNSO60931 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTNSO60931 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNSO60931 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNSO60931 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CTNSO60931 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTNSO60931 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNSO60931 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.92■□□□□ 0.3
CTNSO60931 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNSO60931 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNSO60931 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNSO60931 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.92■□□□□ 0.3
CTNSO60931 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTNSO60931 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNSO60931 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNSO60931 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNSO60931 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNSO60931 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNSO60931 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNSO60931 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNSO60931 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.91■□□□□ 0.3
CTNSO60931 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CTNSO60931 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CTNSO60931 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CTNSO60931 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNSO60931 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNSO60931 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.91■□□□□ 0.3
CTNSO60931 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNSO60931 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNSO60931 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNSO60931 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNSO60931 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CTNSO60931 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CTNSO60931 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.91■□□□□ 0.3
CTNSO60931 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.91■□□□□ 0.3
CTNSO60931 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNSO60931 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.91■□□□□ 0.3
CTNSO60931 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CTNSO60931 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.91■□□□□ 0.3
CTNSO60931 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CTNSO60931 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNSO60931 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CTNSO60931 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CTNSO60931 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTNSO60931 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
CTNSO60931 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CTNSO60931 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTNSO60931 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTNSO60931 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CTNSO60931 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.9■□□□□ 0.3
CTNSO60931 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTNSO60931 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CTNSO60931 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CTNSO60931 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTNSO60931 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.9■□□□□ 0.3
CTNSO60931 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTNSO60931 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.9■□□□□ 0.3
CTNSO60931 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CTNSO60931 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTNSO60931 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTNSO60931 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTNSO60931 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTNSO60931 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CTNSO60931 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTNSO60931 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
CTNSO60931 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTNSO60931 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.9■□□□□ 0.3
CTNSO60931 MTCL1P1-201ENST00000446207 792 ntBASIC16.9■□□□□ 0.3
CTNSO60931 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.9■□□□□ 0.3
CTNSO60931 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CTNSO60931 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTNSO60931 AL592071.1-201ENST00000611956 408 ntBASIC16.9■□□□□ 0.3
CTNSO60931 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.9■□□□□ 0.3
CTNSO60931 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTNSO60931 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.9■□□□□ 0.3
CTNSO60931 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTNSO60931 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CTNSO60931 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTNSO60931 AC138028.4-201ENST00000564984 1845 ntBASIC16.9■□□□□ 0.3
CTNSO60931 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTNSO60931 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CTNSO60931 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CTNSO60931 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTNSO60931 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CTNSO60931 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTNSO60931 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.9■□□□□ 0.3
CTNSO60931 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms