Protein–RNA interactions for Protein: O60706

ABCC9, ATP-binding cassette sub-family C member 9, humanhuman

Predictions only

Length 1,549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC9O60706 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC35.58■■■■□ 3.29
ABCC9O60706 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC35.58■■■■□ 3.29
ABCC9O60706 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
ABCC9O60706 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC35.58■■■■□ 3.29
ABCC9O60706 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC35.58■■■■□ 3.29
ABCC9O60706 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC35.58■■■■□ 3.29
ABCC9O60706 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
ABCC9O60706 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC35.57■■■■□ 3.29
ABCC9O60706 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC35.57■■■■□ 3.29
ABCC9O60706 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC35.57■■■■□ 3.29
ABCC9O60706 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC35.57■■■■□ 3.29
ABCC9O60706 AC125807.1-201ENST00000483097 614 ntBASIC35.57■■■■□ 3.29
ABCC9O60706 AL512356.2-201ENST00000546955 174 ntBASIC35.57■■■■□ 3.29
ABCC9O60706 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.29
ABCC9O60706 AC116407.2-201ENST00000613639 860 ntBASIC35.57■■■■□ 3.29
ABCC9O60706 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC35.57■■■■□ 3.29
ABCC9O60706 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
ABCC9O60706 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC35.57■■■■□ 3.28
ABCC9O60706 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
ABCC9O60706 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC35.57■■■■□ 3.28
ABCC9O60706 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC35.57■■■■□ 3.28
ABCC9O60706 GPS2P2-201ENST00000430745 888 ntBASIC35.57■■■■□ 3.28
ABCC9O60706 IGHV3-71-201ENST00000523324 359 ntBASIC35.57■■■■□ 3.28
ABCC9O60706 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC35.57■■■■□ 3.28
ABCC9O60706 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC35.57■■■■□ 3.28
ABCC9O60706 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC35.57■■■■□ 3.28
ABCC9O60706 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC35.57■■■■□ 3.28
ABCC9O60706 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC35.57■■■■□ 3.28
ABCC9O60706 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
ABCC9O60706 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC35.56■■■■□ 3.28
ABCC9O60706 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC35.56■■■■□ 3.28
ABCC9O60706 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
ABCC9O60706 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC35.56■■■■□ 3.28
ABCC9O60706 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC35.56■■■■□ 3.28
ABCC9O60706 COQ6-210ENST00000554920 649 ntTSL 3 BASIC35.56■■■■□ 3.28
ABCC9O60706 AL662799.1-202ENST00000614205 422 ntBASIC35.56■■■■□ 3.28
ABCC9O60706 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
ABCC9O60706 AP001059.3-201ENST00000619053 235 ntBASIC35.56■■■■□ 3.28
ABCC9O60706 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
ABCC9O60706 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC35.55■■■■□ 3.28
ABCC9O60706 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
ABCC9O60706 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC35.55■■■■□ 3.28
ABCC9O60706 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC35.55■■■■□ 3.28
ABCC9O60706 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC35.55■■■■□ 3.28
ABCC9O60706 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC35.55■■■■□ 3.28
ABCC9O60706 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC35.55■■■■□ 3.28
ABCC9O60706 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
ABCC9O60706 AC069335.1-201ENST00000489972 472 ntBASIC35.55■■■■□ 3.28
ABCC9O60706 SERBP1P5-201ENST00000510079 1181 ntBASIC35.55■■■■□ 3.28
ABCC9O60706 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC35.55■■■■□ 3.28
ABCC9O60706 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
ABCC9O60706 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
ABCC9O60706 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC35.55■■■■□ 3.28
ABCC9O60706 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
ABCC9O60706 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC35.54■■■■□ 3.28
ABCC9O60706 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC35.54■■■■□ 3.28
ABCC9O60706 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
ABCC9O60706 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
ABCC9O60706 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC35.54■■■■□ 3.28
ABCC9O60706 DDX43P3-201ENST00000441064 443 ntBASIC35.54■■■■□ 3.28
ABCC9O60706 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
ABCC9O60706 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC35.54■■■■□ 3.28
ABCC9O60706 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC35.54■■■■□ 3.28
ABCC9O60706 AC010336.2-201ENST00000564226 506 ntBASIC35.54■■■■□ 3.28
ABCC9O60706 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
ABCC9O60706 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC35.54■■■■□ 3.28
ABCC9O60706 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
ABCC9O60706 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC35.54■■■■□ 3.28
ABCC9O60706 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC35.54■■■■□ 3.28
ABCC9O60706 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC35.54■■■■□ 3.28
ABCC9O60706 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
ABCC9O60706 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC35.53■■■■□ 3.28
ABCC9O60706 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC35.53■■■■□ 3.28
ABCC9O60706 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
ABCC9O60706 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC35.53■■■■□ 3.28
ABCC9O60706 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC35.53■■■■□ 3.28
ABCC9O60706 AL355306.1-201ENST00000415580 579 ntBASIC35.53■■■■□ 3.28
ABCC9O60706 AC096633.1-201ENST00000422446 749 ntBASIC35.53■■■■□ 3.28
ABCC9O60706 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC35.53■■■■□ 3.28
ABCC9O60706 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC35.53■■■■□ 3.28
ABCC9O60706 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
ABCC9O60706 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
ABCC9O60706 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC35.53■■■■□ 3.28
ABCC9O60706 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
ABCC9O60706 PWWP2AP1-201ENST00000429776 2273 ntBASIC35.53■■■■□ 3.28
ABCC9O60706 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
ABCC9O60706 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
ABCC9O60706 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC35.52■■■■□ 3.28
ABCC9O60706 FAM58DP-201ENST00000428076 619 ntBASIC35.52■■■■□ 3.28
ABCC9O60706 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC35.52■■■■□ 3.28
ABCC9O60706 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC35.52■■■■□ 3.28
ABCC9O60706 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
ABCC9O60706 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC35.52■■■■□ 3.28
ABCC9O60706 GID4-202ENST00000376345 1391 ntTSL 3 BASIC35.52■■■■□ 3.28
ABCC9O60706 TDG-209ENST00000544861 1387 ntTSL 2 BASIC35.52■■■■□ 3.28
ABCC9O60706 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC35.52■■■■□ 3.28
ABCC9O60706 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
ABCC9O60706 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC35.52■■■■□ 3.28
ABCC9O60706 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC35.52■■■■□ 3.28
ABCC9O60706 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC35.52■■■■□ 3.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms