Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CUBNO60494 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CUBNO60494 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.38□□□□□ -0.11
CUBNO60494 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.38□□□□□ -0.11
CUBNO60494 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CUBNO60494 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.38□□□□□ -0.11
CUBNO60494 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
CUBNO60494 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CUBNO60494 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CUBNO60494 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC14.38□□□□□ -0.11
CUBNO60494 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.38□□□□□ -0.11
CUBNO60494 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.38□□□□□ -0.11
CUBNO60494 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.38□□□□□ -0.11
CUBNO60494 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.38□□□□□ -0.11
CUBNO60494 AC018845.2-201ENST00000568326 409 ntBASIC14.38□□□□□ -0.11
CUBNO60494 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
CUBNO60494 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.38□□□□□ -0.11
CUBNO60494 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CUBNO60494 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CUBNO60494 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CUBNO60494 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CUBNO60494 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CUBNO60494 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CUBNO60494 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CUBNO60494 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.37□□□□□ -0.11
CUBNO60494 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CUBNO60494 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CUBNO60494 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CUBNO60494 GPR89P-201ENST00000407924 1495 ntBASIC14.37□□□□□ -0.11
CUBNO60494 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CUBNO60494 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CUBNO60494 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.37□□□□□ -0.11
CUBNO60494 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.37□□□□□ -0.11
CUBNO60494 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CUBNO60494 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC14.37□□□□□ -0.11
CUBNO60494 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CUBNO60494 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CUBNO60494 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CUBNO60494 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.37□□□□□ -0.11
CUBNO60494 MKNK2P1-201ENST00000437526 628 ntBASIC14.37□□□□□ -0.11
CUBNO60494 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CUBNO60494 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.37□□□□□ -0.11
CUBNO60494 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.37□□□□□ -0.11
CUBNO60494 Z92544.3-201ENST00000624747 417 ntBASIC14.37□□□□□ -0.11
CUBNO60494 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CUBNO60494 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CUBNO60494 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CUBNO60494 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CUBNO60494 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CUBNO60494 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CUBNO60494 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
CUBNO60494 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CUBNO60494 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.36□□□□□ -0.11
CUBNO60494 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CUBNO60494 AC007967.3-201ENST00000434308 558 ntBASIC14.36□□□□□ -0.11
CUBNO60494 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CUBNO60494 C20orf181-201ENST00000623918 480 ntBASIC14.36□□□□□ -0.11
CUBNO60494 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CUBNO60494 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CUBNO60494 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CUBNO60494 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CUBNO60494 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
CUBNO60494 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.36□□□□□ -0.11
CUBNO60494 AC010460.3-201ENST00000511359 1579 ntBASIC14.36□□□□□ -0.11
CUBNO60494 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC14.36□□□□□ -0.11
CUBNO60494 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CUBNO60494 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CUBNO60494 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.36□□□□□ -0.11
CUBNO60494 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CUBNO60494 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.36□□□□□ -0.11
CUBNO60494 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CUBNO60494 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CUBNO60494 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CUBNO60494 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CUBNO60494 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC14.36□□□□□ -0.11
CUBNO60494 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CUBNO60494 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CUBNO60494 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
CUBNO60494 LINC01126-201ENST00000623515 1646 ntBASIC14.36□□□□□ -0.11
CUBNO60494 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC14.36□□□□□ -0.11
CUBNO60494 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CUBNO60494 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.36□□□□□ -0.11
CUBNO60494 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CUBNO60494 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CUBNO60494 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.36□□□□□ -0.11
CUBNO60494 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CUBNO60494 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.36□□□□□ -0.11
CUBNO60494 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.36□□□□□ -0.11
CUBNO60494 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CUBNO60494 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CUBNO60494 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC14.36□□□□□ -0.11
CUBNO60494 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.36□□□□□ -0.11
CUBNO60494 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CUBNO60494 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CUBNO60494 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CUBNO60494 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CUBNO60494 PRSS29P-201ENST00000440800 595 ntBASIC14.35□□□□□ -0.11
CUBNO60494 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.35□□□□□ -0.11
CUBNO60494 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.35□□□□□ -0.11
CUBNO60494 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms