Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 AC004233.3-201ENST00000607794 1269 ntBASIC19.47■□□□□ 0.71
TNRC18O15417 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNRC18O15417 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.47■□□□□ 0.71
TNRC18O15417 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.47■□□□□ 0.71
TNRC18O15417 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.47■□□□□ 0.71
TNRC18O15417 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.47■□□□□ 0.71
TNRC18O15417 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNRC18O15417 AC019129.2-201ENST00000609837 1235 ntBASIC19.47■□□□□ 0.71
TNRC18O15417 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNRC18O15417 AC022144.1-201ENST00000602255 1580 ntBASIC19.47■□□□□ 0.71
TNRC18O15417 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TNRC18O15417 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.47■□□□□ 0.71
TNRC18O15417 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TNRC18O15417 IGHV3-42-201ENST00000520410 361 ntBASIC19.47■□□□□ 0.71
TNRC18O15417 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC19.47■□□□□ 0.71
TNRC18O15417 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.47■□□□□ 0.71
TNRC18O15417 RAB43P1-201ENST00000561790 589 ntBASIC19.47■□□□□ 0.71
TNRC18O15417 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.47■□□□□ 0.71
TNRC18O15417 AL139099.5-201ENST00000635274 300 ntBASIC19.47■□□□□ 0.71
TNRC18O15417 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TNRC18O15417 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNRC18O15417 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.46■□□□□ 0.71
TNRC18O15417 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNRC18O15417 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.46■□□□□ 0.71
TNRC18O15417 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.46■□□□□ 0.71
TNRC18O15417 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNRC18O15417 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TNRC18O15417 AL355306.1-201ENST00000415580 579 ntBASIC19.46■□□□□ 0.71
TNRC18O15417 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TNRC18O15417 RHOQP1-201ENST00000555758 579 ntBASIC19.46■□□□□ 0.71
TNRC18O15417 SNX1-214ENST00000625244 324 ntTSL 5 BASIC19.46■□□□□ 0.71
TNRC18O15417 COX11-210ENST00000639671 696 ntBASIC19.46■□□□□ 0.71
TNRC18O15417 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TNRC18O15417 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TNRC18O15417 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.46■□□□□ 0.71
TNRC18O15417 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.46■□□□□ 0.71
TNRC18O15417 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNRC18O15417 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNRC18O15417 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.46■□□□□ 0.71
TNRC18O15417 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNRC18O15417 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TNRC18O15417 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.46■□□□□ 0.71
TNRC18O15417 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TNRC18O15417 AC112191.1-201ENST00000523689 701 ntBASIC19.46■□□□□ 0.71
TNRC18O15417 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.46■□□□□ 0.71
TNRC18O15417 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNRC18O15417 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TNRC18O15417 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TNRC18O15417 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.45■□□□□ 0.7
TNRC18O15417 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TNRC18O15417 AL024508.2-201ENST00000607749 1894 ntBASIC19.45■□□□□ 0.7
TNRC18O15417 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
TNRC18O15417 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
TNRC18O15417 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TNRC18O15417 AC010460.3-201ENST00000511359 1579 ntBASIC19.45■□□□□ 0.7
TNRC18O15417 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TNRC18O15417 DGCR5-201ENST00000399539 862 ntBASIC19.45■□□□□ 0.7
TNRC18O15417 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
TNRC18O15417 AL512638.1-201ENST00000457493 794 ntBASIC19.45■□□□□ 0.7
TNRC18O15417 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.45■□□□□ 0.7
TNRC18O15417 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.45■□□□□ 0.7
TNRC18O15417 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
TNRC18O15417 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TNRC18O15417 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.45■□□□□ 0.7
TNRC18O15417 AC099568.2-201ENST00000609194 695 ntBASIC19.45■□□□□ 0.7
TNRC18O15417 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TNRC18O15417 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TNRC18O15417 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TNRC18O15417 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TNRC18O15417 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TNRC18O15417 SPDYE7P-202ENST00000420373 878 ntBASIC19.44■□□□□ 0.7
TNRC18O15417 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.44■□□□□ 0.7
TNRC18O15417 TP53TG3HP-202ENST00000569755 579 ntBASIC19.44■□□□□ 0.7
TNRC18O15417 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNRC18O15417 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.44■□□□□ 0.7
TNRC18O15417 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNRC18O15417 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.44■□□□□ 0.7
TNRC18O15417 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNRC18O15417 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TNRC18O15417 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNRC18O15417 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNRC18O15417 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.44■□□□□ 0.7
TNRC18O15417 DDX43P3-201ENST00000441064 443 ntBASIC19.44■□□□□ 0.7
TNRC18O15417 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.44■□□□□ 0.7
TNRC18O15417 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.44■□□□□ 0.7
TNRC18O15417 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.44■□□□□ 0.7
TNRC18O15417 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TNRC18O15417 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TNRC18O15417 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TNRC18O15417 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
TNRC18O15417 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TNRC18O15417 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNRC18O15417 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TNRC18O15417 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNRC18O15417 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TNRC18O15417 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNRC18O15417 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC19.44■□□□□ 0.7
TNRC18O15417 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.43■□□□□ 0.7
TNRC18O15417 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNRC18O15417 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms