Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.02■□□□□ 0.32
CLDN4O14493 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN4O14493 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN4O14493 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN4O14493 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN4O14493 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.02■□□□□ 0.32
CLDN4O14493 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CLDN4O14493 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CLDN4O14493 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.02■□□□□ 0.32
CLDN4O14493 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN4O14493 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.02■□□□□ 0.32
CLDN4O14493 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN4O14493 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN4O14493 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.02■□□□□ 0.32
CLDN4O14493 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN4O14493 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN4O14493 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.02■□□□□ 0.32
CLDN4O14493 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CLDN4O14493 AC069148.1-201ENST00000608741 768 ntBASIC17.02■□□□□ 0.32
CLDN4O14493 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.02■□□□□ 0.32
CLDN4O14493 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN4O14493 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN4O14493 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
CLDN4O14493 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN4O14493 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.02■□□□□ 0.31
CLDN4O14493 AC093010.1-201ENST00000473625 1624 ntBASIC17.02■□□□□ 0.31
CLDN4O14493 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN4O14493 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.02■□□□□ 0.31
CLDN4O14493 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN4O14493 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN4O14493 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CLDN4O14493 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN4O14493 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN4O14493 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN4O14493 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.02■□□□□ 0.31
CLDN4O14493 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN4O14493 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.01■□□□□ 0.31
CLDN4O14493 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN4O14493 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.01■□□□□ 0.31
CLDN4O14493 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CLDN4O14493 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN4O14493 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN4O14493 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CLDN4O14493 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN4O14493 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN4O14493 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.01■□□□□ 0.31
CLDN4O14493 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.01■□□□□ 0.31
CLDN4O14493 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN4O14493 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.01■□□□□ 0.31
CLDN4O14493 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.01■□□□□ 0.31
CLDN4O14493 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.01■□□□□ 0.31
CLDN4O14493 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.01■□□□□ 0.31
CLDN4O14493 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.01■□□□□ 0.31
CLDN4O14493 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.01■□□□□ 0.31
CLDN4O14493 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN4O14493 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN4O14493 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN4O14493 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN4O14493 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN4O14493 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN4O14493 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.01■□□□□ 0.31
CLDN4O14493 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN4O14493 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.01■□□□□ 0.31
CLDN4O14493 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN4O14493 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN4O14493 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
CLDN4O14493 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN4O14493 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN4O14493 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN4O14493 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
CLDN4O14493 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN4O14493 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN4O14493 AC022898.2-201ENST00000616822 1312 ntBASIC17■□□□□ 0.31
CLDN4O14493 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN4O14493 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN4O14493 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN4O14493 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN4O14493 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17■□□□□ 0.31
CLDN4O14493 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17■□□□□ 0.31
CLDN4O14493 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN4O14493 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17■□□□□ 0.31
CLDN4O14493 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN4O14493 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN4O14493 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN4O14493 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN4O14493 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN4O14493 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN4O14493 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CLDN4O14493 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN4O14493 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
CLDN4O14493 KRT18P65-201ENST00000439811 1286 ntBASIC17■□□□□ 0.31
CLDN4O14493 TSSC2-201ENST00000450217 709 ntBASIC17■□□□□ 0.31
CLDN4O14493 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17■□□□□ 0.31
CLDN4O14493 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLDN4O14493 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN4O14493 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CLDN4O14493 IGHV3-41-201ENST00000613121 348 ntBASIC17■□□□□ 0.31
CLDN4O14493 AC009154.2-201ENST00000621177 724 ntBASIC17■□□□□ 0.31
CLDN4O14493 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17■□□□□ 0.31
CLDN4O14493 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms