Protein–RNA interactions for Protein: A0MZ66

SHTN1, Shootin-1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1A0MZ66 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SHTN1A0MZ66 INIP-202ENST00000374236 874 ntTSL 2 BASIC21.7■■□□□ 1.06
SHTN1A0MZ66 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SHTN1A0MZ66 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC21.7■■□□□ 1.06
SHTN1A0MZ66 LBH-203ENST00000404397 543 ntTSL 4 BASIC21.7■■□□□ 1.06
SHTN1A0MZ66 AC004832.2-201ENST00000426397 482 ntBASIC21.7■■□□□ 1.06
SHTN1A0MZ66 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC21.7■■□□□ 1.06
SHTN1A0MZ66 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC21.7■■□□□ 1.06
SHTN1A0MZ66 RNF151-202ENST00000569210 853 ntTSL 2 BASIC21.7■■□□□ 1.06
SHTN1A0MZ66 AL139288.1-201ENST00000623748 933 ntBASIC21.7■■□□□ 1.06
SHTN1A0MZ66 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SHTN1A0MZ66 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SHTN1A0MZ66 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.7■■□□□ 1.06
SHTN1A0MZ66 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SHTN1A0MZ66 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SHTN1A0MZ66 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SHTN1A0MZ66 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SHTN1A0MZ66 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SHTN1A0MZ66 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.7■■□□□ 1.06
SHTN1A0MZ66 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SHTN1A0MZ66 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.7■■□□□ 1.06
SHTN1A0MZ66 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC21.7■■□□□ 1.06
SHTN1A0MZ66 AL499627.1-201ENST00000569373 2188 ntBASIC21.7■■□□□ 1.06
SHTN1A0MZ66 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SHTN1A0MZ66 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.7■■□□□ 1.06
SHTN1A0MZ66 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHTN1A0MZ66 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.69■■□□□ 1.06
SHTN1A0MZ66 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SHTN1A0MZ66 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.69■■□□□ 1.06
SHTN1A0MZ66 AC087289.5-201ENST00000586076 3175 ntBASIC21.69■■□□□ 1.06
SHTN1A0MZ66 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHTN1A0MZ66 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.69■■□□□ 1.06
SHTN1A0MZ66 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.69■■□□□ 1.06
SHTN1A0MZ66 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHTN1A0MZ66 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SHTN1A0MZ66 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHTN1A0MZ66 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SHTN1A0MZ66 DNAJB3-201ENST00000446806 729 ntBASIC21.69■■□□□ 1.06
SHTN1A0MZ66 RNA5SP416-201ENST00000516838 111 ntBASIC21.69■■□□□ 1.06
SHTN1A0MZ66 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
SHTN1A0MZ66 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC21.69■■□□□ 1.06
SHTN1A0MZ66 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHTN1A0MZ66 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC21.69■■□□□ 1.06
SHTN1A0MZ66 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC21.69■■□□□ 1.06
SHTN1A0MZ66 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.69■■□□□ 1.06
SHTN1A0MZ66 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SHTN1A0MZ66 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SHTN1A0MZ66 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SHTN1A0MZ66 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
SHTN1A0MZ66 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.69■■□□□ 1.06
SHTN1A0MZ66 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHTN1A0MZ66 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHTN1A0MZ66 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.69■■□□□ 1.06
SHTN1A0MZ66 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHTN1A0MZ66 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.68■■□□□ 1.06
SHTN1A0MZ66 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHTN1A0MZ66 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
SHTN1A0MZ66 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHTN1A0MZ66 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHTN1A0MZ66 BX005266.1-201ENST00000473402 457 ntBASIC21.68■■□□□ 1.06
SHTN1A0MZ66 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHTN1A0MZ66 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SHTN1A0MZ66 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHTN1A0MZ66 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SHTN1A0MZ66 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.68■■□□□ 1.06
SHTN1A0MZ66 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SHTN1A0MZ66 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SHTN1A0MZ66 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHTN1A0MZ66 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHTN1A0MZ66 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.68■■□□□ 1.06
SHTN1A0MZ66 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHTN1A0MZ66 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.67■■□□□ 1.06
SHTN1A0MZ66 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.67■■□□□ 1.06
SHTN1A0MZ66 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
SHTN1A0MZ66 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHTN1A0MZ66 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHTN1A0MZ66 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SHTN1A0MZ66 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHTN1A0MZ66 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SHTN1A0MZ66 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHTN1A0MZ66 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.67■■□□□ 1.06
SHTN1A0MZ66 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC21.67■■□□□ 1.06
SHTN1A0MZ66 KRT18P2-201ENST00000447938 1258 ntBASIC21.67■■□□□ 1.06
SHTN1A0MZ66 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC21.67■■□□□ 1.06
SHTN1A0MZ66 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC21.67■■□□□ 1.06
SHTN1A0MZ66 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC21.67■■□□□ 1.06
SHTN1A0MZ66 AL596442.2-201ENST00000610240 980 ntBASIC21.67■■□□□ 1.06
SHTN1A0MZ66 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SHTN1A0MZ66 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SHTN1A0MZ66 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHTN1A0MZ66 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.67■■□□□ 1.06
SHTN1A0MZ66 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.67■■□□□ 1.06
SHTN1A0MZ66 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHTN1A0MZ66 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHTN1A0MZ66 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SHTN1A0MZ66 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHTN1A0MZ66 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHTN1A0MZ66 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHTN1A0MZ66 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHTN1A0MZ66 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms