Protein–RNA interactions for Protein: Q9Y608

LRRFIP2, Leucine-rich repeat flightless-interacting protein 2, humanhuman

Known RBP Predictions only

Length 721 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP2Q9Y608 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRFIP2Q9Y608 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRFIP2Q9Y608 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
LRRFIP2Q9Y608 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRFIP2Q9Y608 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
LRRFIP2Q9Y608 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
LRRFIP2Q9Y608 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRFIP2Q9Y608 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC22.56■■□□□ 1.2
LRRFIP2Q9Y608 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
LRRFIP2Q9Y608 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC22.56■■□□□ 1.2
LRRFIP2Q9Y608 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC22.56■■□□□ 1.2
LRRFIP2Q9Y608 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRFIP2Q9Y608 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRFIP2Q9Y608 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRFIP2Q9Y608 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRFIP2Q9Y608 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LRRFIP2Q9Y608 DRAXINP1-201ENST00000437611 948 ntBASIC22.56■■□□□ 1.2
LRRFIP2Q9Y608 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
LRRFIP2Q9Y608 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
LRRFIP2Q9Y608 CIB2-208ENST00000560618 804 ntTSL 2 BASIC22.56■■□□□ 1.2
LRRFIP2Q9Y608 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC22.56■■□□□ 1.2
LRRFIP2Q9Y608 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRFIP2Q9Y608 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRFIP2Q9Y608 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
LRRFIP2Q9Y608 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC22.56■■□□□ 1.2
LRRFIP2Q9Y608 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC22.56■■□□□ 1.2
LRRFIP2Q9Y608 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRFIP2Q9Y608 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LRRFIP2Q9Y608 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC22.55■■□□□ 1.2
LRRFIP2Q9Y608 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC22.55■■□□□ 1.2
LRRFIP2Q9Y608 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
LRRFIP2Q9Y608 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
LRRFIP2Q9Y608 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LRRFIP2Q9Y608 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LRRFIP2Q9Y608 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC22.55■■□□□ 1.2
LRRFIP2Q9Y608 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC22.55■■□□□ 1.2
LRRFIP2Q9Y608 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
LRRFIP2Q9Y608 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LRRFIP2Q9Y608 HCG4P8-203ENST00000443049 980 ntBASIC22.55■■□□□ 1.2
LRRFIP2Q9Y608 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC22.55■■□□□ 1.2
LRRFIP2Q9Y608 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC22.55■■□□□ 1.2
LRRFIP2Q9Y608 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
LRRFIP2Q9Y608 AP005901.3-202ENST00000581653 237 ntBASIC22.55■■□□□ 1.2
LRRFIP2Q9Y608 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LRRFIP2Q9Y608 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LRRFIP2Q9Y608 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC22.55■■□□□ 1.2
LRRFIP2Q9Y608 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
LRRFIP2Q9Y608 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LRRFIP2Q9Y608 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LRRFIP2Q9Y608 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
LRRFIP2Q9Y608 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC22.55■■□□□ 1.2
LRRFIP2Q9Y608 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC22.55■■□□□ 1.2
LRRFIP2Q9Y608 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRFIP2Q9Y608 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LRRFIP2Q9Y608 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
LRRFIP2Q9Y608 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRFIP2Q9Y608 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRFIP2Q9Y608 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRFIP2Q9Y608 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
LRRFIP2Q9Y608 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRFIP2Q9Y608 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LRRFIP2Q9Y608 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
LRRFIP2Q9Y608 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
LRRFIP2Q9Y608 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRFIP2Q9Y608 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC22.54■■□□□ 1.2
LRRFIP2Q9Y608 MTCL1P1-201ENST00000446207 792 ntBASIC22.54■■□□□ 1.2
LRRFIP2Q9Y608 TOB2P1-201ENST00000469761 992 ntBASIC22.54■■□□□ 1.2
LRRFIP2Q9Y608 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LRRFIP2Q9Y608 DUTP2-201ENST00000519164 463 ntBASIC22.54■■□□□ 1.2
LRRFIP2Q9Y608 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC22.54■■□□□ 1.2
LRRFIP2Q9Y608 AC092329.2-201ENST00000598402 547 ntBASIC22.54■■□□□ 1.2
LRRFIP2Q9Y608 ANKRD20A8P-203ENST00000641373 517 ntBASIC22.54■■□□□ 1.2
LRRFIP2Q9Y608 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRFIP2Q9Y608 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRFIP2Q9Y608 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LRRFIP2Q9Y608 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRFIP2Q9Y608 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRFIP2Q9Y608 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRFIP2Q9Y608 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC22.54■■□□□ 1.2
LRRFIP2Q9Y608 AL390961.4-201ENST00000623958 2535 ntBASIC22.54■■□□□ 1.2
LRRFIP2Q9Y608 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
LRRFIP2Q9Y608 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
LRRFIP2Q9Y608 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LRRFIP2Q9Y608 STK4-201ENST00000372801 2038 ntTSL 2 BASIC22.53■■□□□ 1.2
LRRFIP2Q9Y608 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRRFIP2Q9Y608 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LRRFIP2Q9Y608 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
LRRFIP2Q9Y608 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRRFIP2Q9Y608 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRRFIP2Q9Y608 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
LRRFIP2Q9Y608 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LRRFIP2Q9Y608 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LRRFIP2Q9Y608 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRRFIP2Q9Y608 AC020763.4-201ENST00000623414 4170 ntBASIC22.53■■□□□ 1.2
LRRFIP2Q9Y608 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
LRRFIP2Q9Y608 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
LRRFIP2Q9Y608 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC22.53■■□□□ 1.2
LRRFIP2Q9Y608 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRRFIP2Q9Y608 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRRFIP2Q9Y608 LINC00265-3P-201ENST00000447588 903 ntBASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms