Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB11Q9Y5F2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB11Q9Y5F2 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHB11Q9Y5F2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB11Q9Y5F2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDHB11Q9Y5F2 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDHB11Q9Y5F2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDHB11Q9Y5F2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PCDHB11Q9Y5F2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHB11Q9Y5F2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB11Q9Y5F2 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHB11Q9Y5F2 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB11Q9Y5F2 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB11Q9Y5F2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHB11Q9Y5F2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB11Q9Y5F2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PCDHB11Q9Y5F2 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHB11Q9Y5F2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 ABALON-201ENST00000629058 1903 ntBASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 AL121772.3-201ENST00000610840 674 ntBASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 AC018470.1-201ENST00000624790 3129 ntBASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 KRT8P10-201ENST00000450021 1447 ntBASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PCDHB11Q9Y5F2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 MIR662-201ENST00000384847 95 ntBASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 TSPY22P-201ENST00000427496 604 ntBASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 FDX1P1-201ENST00000449115 551 ntBASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 KRT17P6-201ENST00000453795 1220 ntBASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 MIR3180-1-201ENST00000580374 94 ntBASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 MIR3180-3-201ENST00000584616 94 ntBASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 AC079602.3-201ENST00000623931 403 ntBASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 AC026471.1-201ENST00000564629 3026 ntBASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHB11Q9Y5F2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHB11Q9Y5F2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHB11Q9Y5F2 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PCDHB11Q9Y5F2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHB11Q9Y5F2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB11Q9Y5F2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB11Q9Y5F2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB11Q9Y5F2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHB11Q9Y5F2 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms