Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHB2Q9Y5E7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 TSPY12P-201ENST00000421279 868 ntBASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 MINOS1P3-201ENST00000457048 203 ntBASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB2Q9Y5E7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.75
PCDHB2Q9Y5E7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.77■□□□□ 0.75
PCDHB2Q9Y5E7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
PCDHB2Q9Y5E7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PCDHB2Q9Y5E7 LINC01126-201ENST00000623515 1646 ntBASIC19.76■□□□□ 0.75
PCDHB2Q9Y5E7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB2Q9Y5E7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PCDHB2Q9Y5E7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB2Q9Y5E7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB2Q9Y5E7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB2Q9Y5E7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHB2Q9Y5E7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHB2Q9Y5E7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB2Q9Y5E7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB2Q9Y5E7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB2Q9Y5E7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHB2Q9Y5E7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB2Q9Y5E7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
PCDHB2Q9Y5E7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB2Q9Y5E7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB2Q9Y5E7 FDX1P1-201ENST00000449115 551 ntBASIC19.76■□□□□ 0.75
PCDHB2Q9Y5E7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHB2Q9Y5E7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB2Q9Y5E7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHB2Q9Y5E7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB2Q9Y5E7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB2Q9Y5E7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PCDHB2Q9Y5E7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHB2Q9Y5E7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PCDHB2Q9Y5E7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PCDHB2Q9Y5E7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHB2Q9Y5E7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.75■□□□□ 0.75
PCDHB2Q9Y5E7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB2Q9Y5E7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB2Q9Y5E7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB2Q9Y5E7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB2Q9Y5E7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.75■□□□□ 0.75
PCDHB2Q9Y5E7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.75■□□□□ 0.75
PCDHB2Q9Y5E7 AL031008.1-201ENST00000619963 541 ntBASIC19.75■□□□□ 0.75
PCDHB2Q9Y5E7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB2Q9Y5E7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB2Q9Y5E7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHB2Q9Y5E7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB2Q9Y5E7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB2Q9Y5E7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHB2Q9Y5E7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB2Q9Y5E7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHB2Q9Y5E7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB2Q9Y5E7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB2Q9Y5E7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB2Q9Y5E7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB2Q9Y5E7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB2Q9Y5E7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHB2Q9Y5E7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB2Q9Y5E7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PCDHB2Q9Y5E7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHB2Q9Y5E7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB2Q9Y5E7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PCDHB2Q9Y5E7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB2Q9Y5E7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PCDHB2Q9Y5E7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
PCDHB2Q9Y5E7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB2Q9Y5E7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB2Q9Y5E7 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB2Q9Y5E7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB2Q9Y5E7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms