Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 CICP6-201ENST00000457191 2729 ntBASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RCL1Q9Y2P8 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 AP000593.1-201ENST00000393668 712 ntBASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 AC004264.1-201ENST00000608354 794 ntBASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.81□□□□□ -0.04
RCL1Q9Y2P8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 PTPA-216ENST00000432651 857 ntTSL 2 BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 AL109659.2-201ENST00000606809 1674 ntBASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RCL1Q9Y2P8 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms