Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NINLQ9Y2I6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
NINLQ9Y2I6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
NINLQ9Y2I6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC24.63■■□□□ 1.53
NINLQ9Y2I6 AC004408.2-201ENST00000623613 2777 ntBASIC24.63■■□□□ 1.53
NINLQ9Y2I6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NINLQ9Y2I6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
NINLQ9Y2I6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NINLQ9Y2I6 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC24.63■■□□□ 1.53
NINLQ9Y2I6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
NINLQ9Y2I6 AL355385.1-201ENST00000606123 409 ntBASIC24.63■■□□□ 1.53
NINLQ9Y2I6 AL773604.1-201ENST00000617417 272 ntBASIC24.63■■□□□ 1.53
NINLQ9Y2I6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
NINLQ9Y2I6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
NINLQ9Y2I6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
NINLQ9Y2I6 HLA-A-201ENST00000376802 1334 ntBASIC24.63■■□□□ 1.53
NINLQ9Y2I6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
NINLQ9Y2I6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
NINLQ9Y2I6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC24.63■■□□□ 1.53
NINLQ9Y2I6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NINLQ9Y2I6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NINLQ9Y2I6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC24.62■■□□□ 1.53
NINLQ9Y2I6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
NINLQ9Y2I6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC24.62■■□□□ 1.53
NINLQ9Y2I6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NINLQ9Y2I6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC24.62■■□□□ 1.53
NINLQ9Y2I6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC24.62■■□□□ 1.53
NINLQ9Y2I6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC24.62■■□□□ 1.53
NINLQ9Y2I6 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
NINLQ9Y2I6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC24.62■■□□□ 1.53
NINLQ9Y2I6 AC122714.2-201ENST00000502787 707 ntBASIC24.62■■□□□ 1.53
NINLQ9Y2I6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC24.62■■□□□ 1.53
NINLQ9Y2I6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NINLQ9Y2I6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NINLQ9Y2I6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NINLQ9Y2I6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
NINLQ9Y2I6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC24.61■■□□□ 1.53
NINLQ9Y2I6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC24.61■■□□□ 1.53
NINLQ9Y2I6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NINLQ9Y2I6 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
NINLQ9Y2I6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NINLQ9Y2I6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC24.61■■□□□ 1.53
NINLQ9Y2I6 MIR574-201ENST00000385209 96 ntBASIC24.61■■□□□ 1.53
NINLQ9Y2I6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC24.61■■□□□ 1.53
NINLQ9Y2I6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC24.61■■□□□ 1.53
NINLQ9Y2I6 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC24.61■■□□□ 1.53
NINLQ9Y2I6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC24.61■■□□□ 1.53
NINLQ9Y2I6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
NINLQ9Y2I6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC24.61■■□□□ 1.53
NINLQ9Y2I6 AP005117.1-201ENST00000584346 1413 ntBASIC24.61■■□□□ 1.53
NINLQ9Y2I6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NINLQ9Y2I6 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
NINLQ9Y2I6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC24.61■■□□□ 1.53
NINLQ9Y2I6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
NINLQ9Y2I6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
NINLQ9Y2I6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NINLQ9Y2I6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
NINLQ9Y2I6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC24.6■■□□□ 1.53
NINLQ9Y2I6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
NINLQ9Y2I6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC24.6■■□□□ 1.53
NINLQ9Y2I6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC24.6■■□□□ 1.53
NINLQ9Y2I6 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NINLQ9Y2I6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
NINLQ9Y2I6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC24.6■■□□□ 1.53
NINLQ9Y2I6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC24.6■■□□□ 1.53
NINLQ9Y2I6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC24.6■■□□□ 1.53
NINLQ9Y2I6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC24.6■■□□□ 1.53
NINLQ9Y2I6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC24.6■■□□□ 1.53
NINLQ9Y2I6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NINLQ9Y2I6 AC092865.5-201ENST00000545435 363 ntBASIC24.6■■□□□ 1.53
NINLQ9Y2I6 AL139288.1-201ENST00000623748 933 ntBASIC24.6■■□□□ 1.53
NINLQ9Y2I6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
NINLQ9Y2I6 PAN3-AS1-201ENST00000563843 1351 ntBASIC24.6■■□□□ 1.53
NINLQ9Y2I6 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC24.6■■□□□ 1.53
NINLQ9Y2I6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC24.6■■□□□ 1.53
NINLQ9Y2I6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NINLQ9Y2I6 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
NINLQ9Y2I6 AL096828.2-201ENST00000567259 1965 ntBASIC24.6■■□□□ 1.53
NINLQ9Y2I6 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
NINLQ9Y2I6 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
NINLQ9Y2I6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
NINLQ9Y2I6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
NINLQ9Y2I6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
NINLQ9Y2I6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC24.59■■□□□ 1.53
NINLQ9Y2I6 MED22-202ENST00000371999 987 ntTSL 3 BASIC24.59■■□□□ 1.53
NINLQ9Y2I6 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
NINLQ9Y2I6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
NINLQ9Y2I6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
NINLQ9Y2I6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
NINLQ9Y2I6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
NINLQ9Y2I6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
NINLQ9Y2I6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
NINLQ9Y2I6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
NINLQ9Y2I6 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC24.59■■□□□ 1.53
NINLQ9Y2I6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC24.59■■□□□ 1.53
NINLQ9Y2I6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
NINLQ9Y2I6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
NINLQ9Y2I6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC24.59■■□□□ 1.53
NINLQ9Y2I6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
NINLQ9Y2I6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms