Protein–RNA interactions for Protein: Q9NQ35

NRIP3, Nuclear receptor-interacting protein 3, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3Q9NQ35 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NRIP3Q9NQ35 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NRIP3Q9NQ35 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NRIP3Q9NQ35 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NRIP3Q9NQ35 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.32■□□□□ 0.2
NRIP3Q9NQ35 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.32■□□□□ 0.2
NRIP3Q9NQ35 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
NRIP3Q9NQ35 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NRIP3Q9NQ35 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NRIP3Q9NQ35 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.32■□□□□ 0.2
NRIP3Q9NQ35 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.32■□□□□ 0.2
NRIP3Q9NQ35 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.32■□□□□ 0.2
NRIP3Q9NQ35 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 SEC1P-202ENST00000473944 940 ntBASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 AC012317.2-201ENST00000623305 2251 ntBASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NRIP3Q9NQ35 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 AC139713.2-201ENST00000641328 2723 ntBASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 AL512604.3-201ENST00000569583 964 ntBASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 AC010947.1-201ENST00000623454 693 ntBASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
NRIP3Q9NQ35 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NRIP3Q9NQ35 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NRIP3Q9NQ35 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.29■□□□□ 0.2
NRIP3Q9NQ35 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NRIP3Q9NQ35 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.29■□□□□ 0.2
NRIP3Q9NQ35 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NRIP3Q9NQ35 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NRIP3Q9NQ35 KRT8P9-201ENST00000558927 1449 ntBASIC16.29■□□□□ 0.2
NRIP3Q9NQ35 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NRIP3Q9NQ35 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NRIP3Q9NQ35 TSPY15P-201ENST00000457163 923 ntBASIC16.29■□□□□ 0.2
NRIP3Q9NQ35 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.29■□□□□ 0.2
NRIP3Q9NQ35 DUTP2-201ENST00000519164 463 ntBASIC16.29■□□□□ 0.2
NRIP3Q9NQ35 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.29■□□□□ 0.2
NRIP3Q9NQ35 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.29■□□□□ 0.2
NRIP3Q9NQ35 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.29■□□□□ 0.2
NRIP3Q9NQ35 NAPSB-206ENST00000562112 1266 ntBASIC16.29■□□□□ 0.2
NRIP3Q9NQ35 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms