Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF38Q9H0F5 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF38Q9H0F5 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RNF38Q9H0F5 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RNF38Q9H0F5 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF38Q9H0F5 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF38Q9H0F5 MRPL3P1-201ENST00000400109 1033 ntBASIC18.7■□□□□ 0.58
RNF38Q9H0F5 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RNF38Q9H0F5 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF38Q9H0F5 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF38Q9H0F5 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
RNF38Q9H0F5 TNXA-203ENST00000507684 2038 ntBASIC18.7■□□□□ 0.58
RNF38Q9H0F5 AC009533.2-201ENST00000543664 586 ntBASIC18.7■□□□□ 0.58
RNF38Q9H0F5 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF38Q9H0F5 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RNF38Q9H0F5 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
RNF38Q9H0F5 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF38Q9H0F5 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RNF38Q9H0F5 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RNF38Q9H0F5 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF38Q9H0F5 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF38Q9H0F5 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF38Q9H0F5 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF38Q9H0F5 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF38Q9H0F5 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF38Q9H0F5 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF38Q9H0F5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF38Q9H0F5 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF38Q9H0F5 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF38Q9H0F5 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF38Q9H0F5 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF38Q9H0F5 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF38Q9H0F5 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
RNF38Q9H0F5 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
RNF38Q9H0F5 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF38Q9H0F5 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RNF38Q9H0F5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RNF38Q9H0F5 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF38Q9H0F5 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF38Q9H0F5 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF38Q9H0F5 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RNF38Q9H0F5 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF38Q9H0F5 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF38Q9H0F5 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF38Q9H0F5 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RNF38Q9H0F5 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.69■□□□□ 0.58
RNF38Q9H0F5 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.69■□□□□ 0.58
RNF38Q9H0F5 SLC25A6P4-201ENST00000586535 553 ntBASIC18.69■□□□□ 0.58
RNF38Q9H0F5 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.69■□□□□ 0.58
RNF38Q9H0F5 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF38Q9H0F5 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF38Q9H0F5 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RNF38Q9H0F5 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF38Q9H0F5 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.69■□□□□ 0.58
RNF38Q9H0F5 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF38Q9H0F5 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF38Q9H0F5 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF38Q9H0F5 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF38Q9H0F5 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF38Q9H0F5 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF38Q9H0F5 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF38Q9H0F5 INTS4P1-201ENST00000438455 1935 ntBASIC18.68■□□□□ 0.58
RNF38Q9H0F5 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RNF38Q9H0F5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF38Q9H0F5 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF38Q9H0F5 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF38Q9H0F5 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF38Q9H0F5 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF38Q9H0F5 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
RNF38Q9H0F5 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF38Q9H0F5 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.68■□□□□ 0.58
RNF38Q9H0F5 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.68■□□□□ 0.58
RNF38Q9H0F5 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.68■□□□□ 0.58
RNF38Q9H0F5 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF38Q9H0F5 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.68■□□□□ 0.58
RNF38Q9H0F5 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF38Q9H0F5 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.68■□□□□ 0.58
RNF38Q9H0F5 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF38Q9H0F5 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF38Q9H0F5 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF38Q9H0F5 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF38Q9H0F5 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
RNF38Q9H0F5 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF38Q9H0F5 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
RNF38Q9H0F5 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF38Q9H0F5 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RNF38Q9H0F5 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF38Q9H0F5 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RNF38Q9H0F5 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF38Q9H0F5 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms