Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
SLIRPQ9GZT3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLIRPQ9GZT3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
SLIRPQ9GZT3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.92■□□□□ 0.14
SLIRPQ9GZT3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.92■□□□□ 0.14
SLIRPQ9GZT3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.92■□□□□ 0.14
SLIRPQ9GZT3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.92■□□□□ 0.14
SLIRPQ9GZT3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLIRPQ9GZT3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 HLA-J-201ENST00000462773 1622 ntBASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 APTR-203ENST00000430801 583 ntTSL 5 BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 HYMAI-201ENST00000635591 3347 ntBASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 AC068418.2-201ENST00000577309 3703 ntBASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.91■□□□□ 0.14
SLIRPQ9GZT3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 AL512625.2-201ENST00000417533 625 ntBASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 AC093787.1-201ENST00000450396 207 ntBASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 KRT8P11-201ENST00000409686 1436 ntBASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.9■□□□□ 0.14
SLIRPQ9GZT3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
SLIRPQ9GZT3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 AC099343.3-201ENST00000605834 2503 ntBASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms