Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
USB1Q9BQ65 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
USB1Q9BQ65 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USB1Q9BQ65 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
USB1Q9BQ65 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
USB1Q9BQ65 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
USB1Q9BQ65 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.16■□□□□ 0.18
USB1Q9BQ65 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.16■□□□□ 0.18
USB1Q9BQ65 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
USB1Q9BQ65 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USB1Q9BQ65 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
USB1Q9BQ65 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.16■□□□□ 0.18
USB1Q9BQ65 AC011498.5-201ENST00000592027 486 ntBASIC16.16■□□□□ 0.18
USB1Q9BQ65 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.16■□□□□ 0.18
USB1Q9BQ65 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
USB1Q9BQ65 AL121672.3-201ENST00000608644 468 ntBASIC16.16■□□□□ 0.18
USB1Q9BQ65 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
USB1Q9BQ65 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.16■□□□□ 0.18
USB1Q9BQ65 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.16■□□□□ 0.18
USB1Q9BQ65 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USB1Q9BQ65 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
USB1Q9BQ65 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
USB1Q9BQ65 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
USB1Q9BQ65 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USB1Q9BQ65 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.16■□□□□ 0.18
USB1Q9BQ65 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
USB1Q9BQ65 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
USB1Q9BQ65 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
USB1Q9BQ65 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
USB1Q9BQ65 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.16■□□□□ 0.18
USB1Q9BQ65 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
USB1Q9BQ65 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
USB1Q9BQ65 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USB1Q9BQ65 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.15■□□□□ 0.18
USB1Q9BQ65 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
USB1Q9BQ65 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.15■□□□□ 0.18
USB1Q9BQ65 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USB1Q9BQ65 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USB1Q9BQ65 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USB1Q9BQ65 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USB1Q9BQ65 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USB1Q9BQ65 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USB1Q9BQ65 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USB1Q9BQ65 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
USB1Q9BQ65 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USB1Q9BQ65 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
USB1Q9BQ65 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USB1Q9BQ65 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USB1Q9BQ65 BX276092.5-203ENST00000456199 560 ntBASIC16.15■□□□□ 0.18
USB1Q9BQ65 AC092597.1-201ENST00000487352 616 ntBASIC16.15■□□□□ 0.18
USB1Q9BQ65 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.15■□□□□ 0.18
USB1Q9BQ65 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.15■□□□□ 0.18
USB1Q9BQ65 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
USB1Q9BQ65 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.15■□□□□ 0.18
USB1Q9BQ65 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.15■□□□□ 0.18
USB1Q9BQ65 AC010326.4-201ENST00000604665 891 ntBASIC16.15■□□□□ 0.18
USB1Q9BQ65 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
USB1Q9BQ65 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USB1Q9BQ65 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USB1Q9BQ65 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
USB1Q9BQ65 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
USB1Q9BQ65 AC141586.5-201ENST00000624546 2050 ntBASIC16.15■□□□□ 0.18
USB1Q9BQ65 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USB1Q9BQ65 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.15■□□□□ 0.18
USB1Q9BQ65 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USB1Q9BQ65 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
USB1Q9BQ65 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.15■□□□□ 0.18
USB1Q9BQ65 AL357033.4-201ENST00000617703 1807 ntBASIC16.15■□□□□ 0.18
USB1Q9BQ65 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USB1Q9BQ65 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
USB1Q9BQ65 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
USB1Q9BQ65 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
USB1Q9BQ65 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
USB1Q9BQ65 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
USB1Q9BQ65 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
USB1Q9BQ65 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
USB1Q9BQ65 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
USB1Q9BQ65 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
USB1Q9BQ65 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
USB1Q9BQ65 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
USB1Q9BQ65 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
USB1Q9BQ65 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
USB1Q9BQ65 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.14■□□□□ 0.17
USB1Q9BQ65 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
USB1Q9BQ65 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
USB1Q9BQ65 AC112777.1-201ENST00000540175 1423 ntBASIC16.14■□□□□ 0.17
USB1Q9BQ65 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
USB1Q9BQ65 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
USB1Q9BQ65 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
USB1Q9BQ65 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
USB1Q9BQ65 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
USB1Q9BQ65 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
USB1Q9BQ65 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
USB1Q9BQ65 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.14■□□□□ 0.17
USB1Q9BQ65 ATP5G2P1-201ENST00000433580 426 ntBASIC16.14■□□□□ 0.17
USB1Q9BQ65 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
USB1Q9BQ65 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.14■□□□□ 0.17
USB1Q9BQ65 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.14■□□□□ 0.17
USB1Q9BQ65 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.14■□□□□ 0.17
USB1Q9BQ65 KRT8P26-201ENST00000534154 1276 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms