Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 AC016734.2-201ENST00000624325 1377 ntBASIC16.59■□□□□ 0.25
TIMP4Q99727 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TIMP4Q99727 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TIMP4Q99727 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TIMP4Q99727 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TIMP4Q99727 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.59■□□□□ 0.25
TIMP4Q99727 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TIMP4Q99727 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.58■□□□□ 0.25
TIMP4Q99727 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
TIMP4Q99727 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TIMP4Q99727 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TIMP4Q99727 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TIMP4Q99727 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TIMP4Q99727 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TIMP4Q99727 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TIMP4Q99727 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TIMP4Q99727 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TIMP4Q99727 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TIMP4Q99727 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TIMP4Q99727 TSSC2-201ENST00000450217 709 ntBASIC16.58■□□□□ 0.24
TIMP4Q99727 KRT8P26-201ENST00000534154 1276 ntBASIC16.58■□□□□ 0.24
TIMP4Q99727 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.58■□□□□ 0.24
TIMP4Q99727 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.58■□□□□ 0.24
TIMP4Q99727 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.58■□□□□ 0.24
TIMP4Q99727 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.58■□□□□ 0.24
TIMP4Q99727 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
TIMP4Q99727 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TIMP4Q99727 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.58■□□□□ 0.24
TIMP4Q99727 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TIMP4Q99727 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.58■□□□□ 0.24
TIMP4Q99727 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.58■□□□□ 0.24
TIMP4Q99727 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TIMP4Q99727 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.58■□□□□ 0.24
TIMP4Q99727 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
TIMP4Q99727 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TIMP4Q99727 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TIMP4Q99727 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP4Q99727 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP4Q99727 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TIMP4Q99727 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
TIMP4Q99727 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
TIMP4Q99727 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TIMP4Q99727 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.57■□□□□ 0.24
TIMP4Q99727 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP4Q99727 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
TIMP4Q99727 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TIMP4Q99727 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP4Q99727 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP4Q99727 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.57■□□□□ 0.24
TIMP4Q99727 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.57■□□□□ 0.24
TIMP4Q99727 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP4Q99727 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.57■□□□□ 0.24
TIMP4Q99727 RNF126P1-202ENST00000569893 925 ntBASIC16.57■□□□□ 0.24
TIMP4Q99727 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP4Q99727 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.57■□□□□ 0.24
TIMP4Q99727 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.57■□□□□ 0.24
TIMP4Q99727 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP4Q99727 NPAP1P7-201ENST00000613027 823 ntBASIC16.57■□□□□ 0.24
TIMP4Q99727 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.57■□□□□ 0.24
TIMP4Q99727 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP4Q99727 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.57■□□□□ 0.24
TIMP4Q99727 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.57■□□□□ 0.24
TIMP4Q99727 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.57■□□□□ 0.24
TIMP4Q99727 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP4Q99727 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TIMP4Q99727 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP4Q99727 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP4Q99727 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP4Q99727 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP4Q99727 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP4Q99727 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP4Q99727 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP4Q99727 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP4Q99727 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP4Q99727 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP4Q99727 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TIMP4Q99727 AL163051.1-201ENST00000569214 1512 ntBASIC16.56■□□□□ 0.24
TIMP4Q99727 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP4Q99727 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TIMP4Q99727 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
TIMP4Q99727 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP4Q99727 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP4Q99727 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP4Q99727 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP4Q99727 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP4Q99727 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TIMP4Q99727 TSPY22P-201ENST00000427496 604 ntBASIC16.56■□□□□ 0.24
TIMP4Q99727 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.56■□□□□ 0.24
TIMP4Q99727 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.56■□□□□ 0.24
TIMP4Q99727 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.56■□□□□ 0.24
TIMP4Q99727 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP4Q99727 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.56■□□□□ 0.24
TIMP4Q99727 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
TIMP4Q99727 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP4Q99727 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.56■□□□□ 0.24
TIMP4Q99727 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP4Q99727 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP4Q99727 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP4Q99727 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP4Q99727 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms