Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL13Q99616 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CCL13Q99616 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL13Q99616 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCL13Q99616 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL13Q99616 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.16■□□□□ 0.02
CCL13Q99616 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.16■□□□□ 0.02
CCL13Q99616 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.16■□□□□ 0.02
CCL13Q99616 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.16■□□□□ 0.02
CCL13Q99616 PCED1CP-201ENST00000419887 785 ntBASIC15.16■□□□□ 0.02
CCL13Q99616 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.16■□□□□ 0.02
CCL13Q99616 RNF126P1-202ENST00000569893 925 ntBASIC15.16■□□□□ 0.02
CCL13Q99616 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.16■□□□□ 0.02
CCL13Q99616 AC005332.3-201ENST00000589904 676 ntBASIC15.16■□□□□ 0.02
CCL13Q99616 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCL13Q99616 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
CCL13Q99616 LINC00602-201ENST00000629776 2065 ntBASIC15.16■□□□□ 0.02
CCL13Q99616 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL13Q99616 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL13Q99616 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CCL13Q99616 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCL13Q99616 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL13Q99616 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL13Q99616 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL13Q99616 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL13Q99616 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCL13Q99616 ABALON-201ENST00000629058 1903 ntBASIC15.15■□□□□ 0.02
CCL13Q99616 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL13Q99616 KRT89P-201ENST00000620027 1478 ntBASIC15.15■□□□□ 0.02
CCL13Q99616 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL13Q99616 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CCL13Q99616 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL13Q99616 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CCL13Q99616 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCL13Q99616 Z83836.1-201ENST00000624605 1642 ntBASIC15.15■□□□□ 0.02
CCL13Q99616 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CCL13Q99616 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL13Q99616 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCL13Q99616 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL13Q99616 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCL13Q99616 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL13Q99616 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL13Q99616 IGHGP-201ENST00000390555 1178 ntBASIC15.15■□□□□ 0.02
CCL13Q99616 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.15■□□□□ 0.02
CCL13Q99616 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCL13Q99616 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.15■□□□□ 0.02
CCL13Q99616 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.15■□□□□ 0.02
CCL13Q99616 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.15■□□□□ 0.02
CCL13Q99616 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.15■□□□□ 0.02
CCL13Q99616 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.15■□□□□ 0.02
CCL13Q99616 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.15■□□□□ 0.02
CCL13Q99616 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.15■□□□□ 0.02
CCL13Q99616 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
CCL13Q99616 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CCL13Q99616 AC004263.2-201ENST00000617183 678 ntBASIC15.15■□□□□ 0.02
CCL13Q99616 AL358472.4-201ENST00000633140 710 ntBASIC15.15■□□□□ 0.02
CCL13Q99616 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.15■□□□□ 0.02
CCL13Q99616 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL13Q99616 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL13Q99616 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCL13Q99616 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CCL13Q99616 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.15■□□□□ 0.02
CCL13Q99616 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCL13Q99616 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.15■□□□□ 0.02
CCL13Q99616 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
CCL13Q99616 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CCL13Q99616 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.14■□□□□ 0.01
CCL13Q99616 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL13Q99616 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL13Q99616 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CCL13Q99616 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCL13Q99616 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL13Q99616 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL13Q99616 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCL13Q99616 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL13Q99616 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CCL13Q99616 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CCL13Q99616 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.14■□□□□ 0.01
CCL13Q99616 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL13Q99616 IER3-202ENST00000376377 1350 ntBASIC15.14■□□□□ 0.01
CCL13Q99616 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.14■□□□□ 0.01
CCL13Q99616 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.14■□□□□ 0.01
CCL13Q99616 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CCL13Q99616 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL13Q99616 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCL13Q99616 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCL13Q99616 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCL13Q99616 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL13Q99616 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.14■□□□□ 0.01
CCL13Q99616 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.14■□□□□ 0.01
CCL13Q99616 AC011498.5-201ENST00000592027 486 ntBASIC15.14■□□□□ 0.01
CCL13Q99616 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.14■□□□□ 0.01
CCL13Q99616 GPR32P1-201ENST00000601788 811 ntBASIC15.14■□□□□ 0.01
CCL13Q99616 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.14■□□□□ 0.01
CCL13Q99616 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL13Q99616 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL13Q99616 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.14■□□□□ 0.01
CCL13Q99616 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL13Q99616 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL13Q99616 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms