Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNX27Q96L92 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SNX27Q96L92 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX27Q96L92 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SNX27Q96L92 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.46■□□□□ 0.71
SNX27Q96L92 AL096828.2-201ENST00000567259 1965 ntBASIC19.46■□□□□ 0.71
SNX27Q96L92 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX27Q96L92 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.46■□□□□ 0.71
SNX27Q96L92 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.46■□□□□ 0.71
SNX27Q96L92 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
SNX27Q96L92 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SNX27Q96L92 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX27Q96L92 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.46■□□□□ 0.71
SNX27Q96L92 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SNX27Q96L92 AC096582.2-201ENST00000510860 516 ntBASIC19.46■□□□□ 0.71
SNX27Q96L92 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.46■□□□□ 0.71
SNX27Q96L92 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.46■□□□□ 0.71
SNX27Q96L92 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.46■□□□□ 0.71
SNX27Q96L92 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.46■□□□□ 0.71
SNX27Q96L92 AL138831.2-201ENST00000606564 490 ntBASIC19.46■□□□□ 0.71
SNX27Q96L92 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SNX27Q96L92 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX27Q96L92 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SNX27Q96L92 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX27Q96L92 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.46■□□□□ 0.71
SNX27Q96L92 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX27Q96L92 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX27Q96L92 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX27Q96L92 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX27Q96L92 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX27Q96L92 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
SNX27Q96L92 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SNX27Q96L92 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNX27Q96L92 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.46■□□□□ 0.71
SNX27Q96L92 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNX27Q96L92 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
SNX27Q96L92 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNX27Q96L92 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNX27Q96L92 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNX27Q96L92 AC135776.1-201ENST00000319817 2481 ntBASIC19.45■□□□□ 0.7
SNX27Q96L92 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNX27Q96L92 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.45■□□□□ 0.7
SNX27Q96L92 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNX27Q96L92 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNX27Q96L92 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.45■□□□□ 0.7
SNX27Q96L92 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNX27Q96L92 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.45■□□□□ 0.7
SNX27Q96L92 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNX27Q96L92 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNX27Q96L92 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNX27Q96L92 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.45■□□□□ 0.7
SNX27Q96L92 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.45■□□□□ 0.7
SNX27Q96L92 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SNX27Q96L92 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.45■□□□□ 0.7
SNX27Q96L92 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.45■□□□□ 0.7
SNX27Q96L92 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNX27Q96L92 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.45■□□□□ 0.7
SNX27Q96L92 AC114341.1-201ENST00000618070 349 ntBASIC19.45■□□□□ 0.7
SNX27Q96L92 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNX27Q96L92 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNX27Q96L92 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SNX27Q96L92 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNX27Q96L92 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.45■□□□□ 0.7
SNX27Q96L92 AC090164.3-201ENST00000610780 2143 ntBASIC19.45■□□□□ 0.7
SNX27Q96L92 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.44■□□□□ 0.7
SNX27Q96L92 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX27Q96L92 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNX27Q96L92 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.44■□□□□ 0.7
SNX27Q96L92 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.44■□□□□ 0.7
SNX27Q96L92 AC125634.1-201ENST00000438758 1403 ntBASIC19.44■□□□□ 0.7
SNX27Q96L92 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.44■□□□□ 0.7
SNX27Q96L92 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX27Q96L92 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX27Q96L92 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.44■□□□□ 0.7
SNX27Q96L92 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX27Q96L92 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX27Q96L92 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX27Q96L92 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SNX27Q96L92 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX27Q96L92 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.44■□□□□ 0.7
SNX27Q96L92 POM121L3P-201ENST00000419331 1163 ntBASIC19.44■□□□□ 0.7
SNX27Q96L92 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.44■□□□□ 0.7
SNX27Q96L92 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.44■□□□□ 0.7
SNX27Q96L92 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.44■□□□□ 0.7
SNX27Q96L92 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.44■□□□□ 0.7
SNX27Q96L92 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.44■□□□□ 0.7
SNX27Q96L92 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SNX27Q96L92 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
SNX27Q96L92 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SNX27Q96L92 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX27Q96L92 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNX27Q96L92 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNX27Q96L92 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNX27Q96L92 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SNX27Q96L92 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX27Q96L92 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNX27Q96L92 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX27Q96L92 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX27Q96L92 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX27Q96L92 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms