Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM5Q96HC4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM5Q96HC4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM5Q96HC4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PDLIM5Q96HC4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM5Q96HC4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PDLIM5Q96HC4 FAM8A6P-201ENST00000407496 1135 ntBASIC17.68■□□□□ 0.42
PDLIM5Q96HC4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM5Q96HC4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM5Q96HC4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM5Q96HC4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
PDLIM5Q96HC4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.68■□□□□ 0.42
PDLIM5Q96HC4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PDLIM5Q96HC4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PDLIM5Q96HC4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM5Q96HC4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM5Q96HC4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM5Q96HC4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
PDLIM5Q96HC4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM5Q96HC4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.68■□□□□ 0.42
PDLIM5Q96HC4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM5Q96HC4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.68■□□□□ 0.42
PDLIM5Q96HC4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.68■□□□□ 0.42
PDLIM5Q96HC4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 AC012317.2-201ENST00000623305 2251 ntBASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDLIM5Q96HC4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDLIM5Q96HC4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDLIM5Q96HC4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.66■□□□□ 0.42
PDLIM5Q96HC4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDLIM5Q96HC4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDLIM5Q96HC4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PDLIM5Q96HC4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDLIM5Q96HC4 MIR662-201ENST00000384847 95 ntBASIC17.66■□□□□ 0.42
PDLIM5Q96HC4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PDLIM5Q96HC4 KRT18P48-201ENST00000434763 852 ntBASIC17.66■□□□□ 0.42
PDLIM5Q96HC4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.66■□□□□ 0.42
PDLIM5Q96HC4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
PDLIM5Q96HC4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.66■□□□□ 0.42
PDLIM5Q96HC4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.66■□□□□ 0.42
PDLIM5Q96HC4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDLIM5Q96HC4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PDLIM5Q96HC4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDLIM5Q96HC4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.66■□□□□ 0.42
PDLIM5Q96HC4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDLIM5Q96HC4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.66■□□□□ 0.42
PDLIM5Q96HC4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDLIM5Q96HC4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.66■□□□□ 0.42
PDLIM5Q96HC4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PDLIM5Q96HC4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.66■□□□□ 0.42
PDLIM5Q96HC4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.66■□□□□ 0.42
PDLIM5Q96HC4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.66■□□□□ 0.42
PDLIM5Q96HC4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM5Q96HC4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM5Q96HC4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM5Q96HC4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM5Q96HC4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.65■□□□□ 0.42
PDLIM5Q96HC4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM5Q96HC4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.65■□□□□ 0.42
PDLIM5Q96HC4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM5Q96HC4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.65■□□□□ 0.42
PDLIM5Q96HC4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.65■□□□□ 0.42
PDLIM5Q96HC4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM5Q96HC4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM5Q96HC4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PDLIM5Q96HC4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM5Q96HC4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDLIM5Q96HC4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.65■□□□□ 0.42
PDLIM5Q96HC4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PDLIM5Q96HC4 AC092597.1-201ENST00000487352 616 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms