Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
USP9XQ93008 FP475955.4-201ENST00000623131 1990 ntBASIC15.66■□□□□ 0.1
USP9XQ93008 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
USP9XQ93008 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
USP9XQ93008 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
USP9XQ93008 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
USP9XQ93008 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC15.66■□□□□ 0.1
USP9XQ93008 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
USP9XQ93008 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
USP9XQ93008 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
USP9XQ93008 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.66■□□□□ 0.1
USP9XQ93008 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
USP9XQ93008 FAM58CP-201ENST00000435741 640 ntBASIC15.66■□□□□ 0.1
USP9XQ93008 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
USP9XQ93008 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC15.66■□□□□ 0.1
USP9XQ93008 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.66■□□□□ 0.1
USP9XQ93008 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.66■□□□□ 0.1
USP9XQ93008 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.66■□□□□ 0.1
USP9XQ93008 AC091812.2-201ENST00000619081 385 ntBASIC15.66■□□□□ 0.1
USP9XQ93008 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.66■□□□□ 0.1
USP9XQ93008 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP9XQ93008 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.65■□□□□ 0.1
USP9XQ93008 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
USP9XQ93008 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP9XQ93008 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP9XQ93008 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP9XQ93008 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.65■□□□□ 0.1
USP9XQ93008 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.65■□□□□ 0.1
USP9XQ93008 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.65■□□□□ 0.1
USP9XQ93008 AC008687.5-201ENST00000593746 558 ntBASIC15.65■□□□□ 0.1
USP9XQ93008 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP9XQ93008 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
USP9XQ93008 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
USP9XQ93008 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.65■□□□□ 0.1
USP9XQ93008 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP9XQ93008 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP9XQ93008 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.65■□□□□ 0.1
USP9XQ93008 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
USP9XQ93008 AC007967.3-201ENST00000434308 558 ntBASIC15.65■□□□□ 0.1
USP9XQ93008 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.65■□□□□ 0.1
USP9XQ93008 AC112698.1-201ENST00000510299 916 ntBASIC15.65■□□□□ 0.1
USP9XQ93008 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.65■□□□□ 0.1
USP9XQ93008 AC004877.2-201ENST00000623941 599 ntBASIC15.65■□□□□ 0.1
USP9XQ93008 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP9XQ93008 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP9XQ93008 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP9XQ93008 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP9XQ93008 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.64■□□□□ 0.09
USP9XQ93008 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP9XQ93008 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15.64■□□□□ 0.09
USP9XQ93008 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
USP9XQ93008 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
USP9XQ93008 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP9XQ93008 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP9XQ93008 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
USP9XQ93008 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.64■□□□□ 0.09
USP9XQ93008 TFAMP1-201ENST00000412727 736 ntBASIC15.64■□□□□ 0.09
USP9XQ93008 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.64■□□□□ 0.09
USP9XQ93008 UGT1A2P-201ENST00000454886 866 ntBASIC15.64■□□□□ 0.09
USP9XQ93008 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
USP9XQ93008 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP9XQ93008 MIR4751-201ENST00000578027 74 ntBASIC15.64■□□□□ 0.09
USP9XQ93008 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.64■□□□□ 0.09
USP9XQ93008 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.64■□□□□ 0.09
USP9XQ93008 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
USP9XQ93008 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.64■□□□□ 0.09
USP9XQ93008 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP9XQ93008 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.64■□□□□ 0.09
USP9XQ93008 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
USP9XQ93008 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP9XQ93008 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP9XQ93008 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
USP9XQ93008 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.64■□□□□ 0.09
USP9XQ93008 RHOQP3-201ENST00000437982 621 ntBASIC15.64■□□□□ 0.09
USP9XQ93008 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.64■□□□□ 0.09
USP9XQ93008 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
USP9XQ93008 DUX4L27-201ENST00000554796 1261 ntBASIC15.64■□□□□ 0.09
USP9XQ93008 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.64■□□□□ 0.09
USP9XQ93008 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.64■□□□□ 0.09
USP9XQ93008 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
USP9XQ93008 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP9XQ93008 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
USP9XQ93008 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
USP9XQ93008 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.64■□□□□ 0.09
USP9XQ93008 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP9XQ93008 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP9XQ93008 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP9XQ93008 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.64■□□□□ 0.09
USP9XQ93008 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
USP9XQ93008 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.63■□□□□ 0.09
USP9XQ93008 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.63■□□□□ 0.09
USP9XQ93008 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
USP9XQ93008 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
USP9XQ93008 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.63■□□□□ 0.09
USP9XQ93008 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
USP9XQ93008 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
USP9XQ93008 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
USP9XQ93008 SPDYE21P-201ENST00000413323 827 ntBASIC15.63■□□□□ 0.09
USP9XQ93008 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
USP9XQ93008 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms