Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX1Q92499 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX1Q92499 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.27■□□□□ 0.68
DDX1Q92499 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DDX1Q92499 KRT18P38-201ENST00000449496 1282 ntBASIC19.27■□□□□ 0.68
DDX1Q92499 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DDX1Q92499 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.27■□□□□ 0.68
DDX1Q92499 AC113404.2-201ENST00000507884 177 ntBASIC19.27■□□□□ 0.68
DDX1Q92499 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.27■□□□□ 0.68
DDX1Q92499 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.27■□□□□ 0.68
DDX1Q92499 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.27■□□□□ 0.68
DDX1Q92499 AL136038.4-201ENST00000603606 1261 ntBASIC19.27■□□□□ 0.68
DDX1Q92499 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
DDX1Q92499 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DDX1Q92499 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX1Q92499 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
DDX1Q92499 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
DDX1Q92499 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
DDX1Q92499 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DDX1Q92499 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.27■□□□□ 0.68
DDX1Q92499 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
DDX1Q92499 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
DDX1Q92499 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
DDX1Q92499 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
DDX1Q92499 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
DDX1Q92499 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX1Q92499 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
DDX1Q92499 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.26■□□□□ 0.67
DDX1Q92499 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX1Q92499 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.26■□□□□ 0.67
DDX1Q92499 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
DDX1Q92499 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.26■□□□□ 0.67
DDX1Q92499 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX1Q92499 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
DDX1Q92499 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX1Q92499 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX1Q92499 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DDX1Q92499 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.26■□□□□ 0.67
DDX1Q92499 AC092597.1-201ENST00000487352 616 ntBASIC19.26■□□□□ 0.67
DDX1Q92499 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX1Q92499 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DDX1Q92499 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
DDX1Q92499 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.26■□□□□ 0.67
DDX1Q92499 KRT89P-201ENST00000620027 1478 ntBASIC19.26■□□□□ 0.67
DDX1Q92499 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX1Q92499 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
DDX1Q92499 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX1Q92499 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DDX1Q92499 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
DDX1Q92499 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDX1Q92499 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX1Q92499 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
DDX1Q92499 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.25■□□□□ 0.67
DDX1Q92499 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
DDX1Q92499 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX1Q92499 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.25■□□□□ 0.67
DDX1Q92499 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX1Q92499 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDX1Q92499 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
DDX1Q92499 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.25■□□□□ 0.67
DDX1Q92499 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX1Q92499 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDX1Q92499 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.25■□□□□ 0.67
DDX1Q92499 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.25■□□□□ 0.67
DDX1Q92499 AC008687.5-201ENST00000593746 558 ntBASIC19.25■□□□□ 0.67
DDX1Q92499 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DDX1Q92499 AC024563.2-201ENST00000603282 481 ntBASIC19.25■□□□□ 0.67
DDX1Q92499 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
DDX1Q92499 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
DDX1Q92499 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX1Q92499 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.25■□□□□ 0.67
DDX1Q92499 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
DDX1Q92499 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
DDX1Q92499 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX1Q92499 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX1Q92499 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX1Q92499 AC012317.2-201ENST00000623305 2251 ntBASIC19.25■□□□□ 0.67
DDX1Q92499 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
DDX1Q92499 AC005332.1-201ENST00000577698 1310 ntBASIC19.25■□□□□ 0.67
DDX1Q92499 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
DDX1Q92499 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX1Q92499 LINC00602-201ENST00000629776 2065 ntBASIC19.24■□□□□ 0.67
DDX1Q92499 AC100803.2-201ENST00000562459 1963 ntBASIC19.24■□□□□ 0.67
DDX1Q92499 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DDX1Q92499 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX1Q92499 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.24■□□□□ 0.67
DDX1Q92499 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DDX1Q92499 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX1Q92499 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
DDX1Q92499 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX1Q92499 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX1Q92499 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.24■□□□□ 0.67
DDX1Q92499 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DDX1Q92499 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DDX1Q92499 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.24■□□□□ 0.67
DDX1Q92499 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
DDX1Q92499 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
DDX1Q92499 AC006538.3-201ENST00000612495 578 ntBASIC19.24■□□□□ 0.67
DDX1Q92499 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.24■□□□□ 0.67
DDX1Q92499 HYMAI.1-201ENST00000620949 238 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms