Protein–RNA interactions for Protein: Q8WXE1

ATRIP, ATR-interacting protein, humanhuman

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIPQ8WXE1 AL031133.1-201ENST00000406807 723 ntBASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 FAM8A6P-201ENST00000407496 1135 ntBASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 AC026271.3-201ENST00000571884 352 ntBASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 DGCR10-201ENST00000609839 495 ntBASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATRIPQ8WXE1 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 KRT8P45-201ENST00000414328 1447 ntBASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 AC117947.1-201ENST00000427448 529 ntBASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 AC092647.4-201ENST00000457211 535 ntBASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 AC097488.1-201ENST00000507834 756 ntBASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATRIPQ8WXE1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATRIPQ8WXE1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
ATRIPQ8WXE1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATRIPQ8WXE1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.92■□□□□ 0.78
ATRIPQ8WXE1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATRIPQ8WXE1 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATRIPQ8WXE1 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.92■□□□□ 0.78
ATRIPQ8WXE1 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATRIPQ8WXE1 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.92■□□□□ 0.78
ATRIPQ8WXE1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.92■□□□□ 0.78
ATRIPQ8WXE1 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.92■□□□□ 0.78
ATRIPQ8WXE1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.92■□□□□ 0.78
ATRIPQ8WXE1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATRIPQ8WXE1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.92■□□□□ 0.78
ATRIPQ8WXE1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.92■□□□□ 0.78
ATRIPQ8WXE1 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
ATRIPQ8WXE1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATRIPQ8WXE1 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATRIPQ8WXE1 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATRIPQ8WXE1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATRIPQ8WXE1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
ATRIPQ8WXE1 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATRIPQ8WXE1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.91■□□□□ 0.78
ATRIPQ8WXE1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATRIPQ8WXE1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATRIPQ8WXE1 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATRIPQ8WXE1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATRIPQ8WXE1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATRIPQ8WXE1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATRIPQ8WXE1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATRIPQ8WXE1 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATRIPQ8WXE1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.91■□□□□ 0.78
ATRIPQ8WXE1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATRIPQ8WXE1 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.91■□□□□ 0.78
ATRIPQ8WXE1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.91■□□□□ 0.78
ATRIPQ8WXE1 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.91■□□□□ 0.78
ATRIPQ8WXE1 AC139887.4-201ENST00000607877 719 ntBASIC19.91■□□□□ 0.78
ATRIPQ8WXE1 FAM87A-204ENST00000613235 858 ntBASIC19.91■□□□□ 0.78
ATRIPQ8WXE1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms