Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 AC093010.1-201ENST00000473625 1624 ntBASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 MIR3180-4-201ENST00000582223 153 ntBASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 AC012317.2-201ENST00000623305 2251 ntBASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LINC00346Q8IVM7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
LINC00346Q8IVM7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LINC00346Q8IVM7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.02■□□□□ 0.16
LINC00346Q8IVM7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LINC00346Q8IVM7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LINC00346Q8IVM7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.02■□□□□ 0.16
LINC00346Q8IVM7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
LINC00346Q8IVM7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LINC00346Q8IVM7 LTB4R2-202ENST00000528054 3092 ntBASIC16.02■□□□□ 0.16
LINC00346Q8IVM7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
LINC00346Q8IVM7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
LINC00346Q8IVM7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LINC00346Q8IVM7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LINC00346Q8IVM7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.02■□□□□ 0.16
LINC00346Q8IVM7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LINC00346Q8IVM7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
LINC00346Q8IVM7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.02■□□□□ 0.16
LINC00346Q8IVM7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LINC00346Q8IVM7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms