Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 PCED1CP-201ENST00000419887 785 ntBASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 AC113404.2-201ENST00000507884 177 ntBASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 AC005332.3-201ENST00000589904 676 ntBASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 GPR32P1-201ENST00000601788 811 ntBASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LYSMD3Q7Z3D4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 Z83836.1-201ENST00000624605 1642 ntBASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 LINC00167-201ENST00000530583 1419 ntBASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 AL390719.2-201ENST00000606993 987 ntBASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 AC116407.4-201ENST00000623319 1061 ntBASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.16■□□□□ 0.5
LYSMD3Q7Z3D4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 AC132938.6-201ENST00000623828 1655 ntBASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 AC011498.5-201ENST00000592027 486 ntBASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 IER3-202ENST00000376377 1350 ntBASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD3Q7Z3D4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms