Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC126763.1-201ENST00000552015 2118 ntBASIC21■□□□□ 0.95
CCDC144BQ3MJ40 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21■□□□□ 0.95
CCDC144BQ3MJ40 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21■□□□□ 0.95
CCDC144BQ3MJ40 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CCDC144BQ3MJ40 AC139713.2-201ENST00000641328 2723 ntBASIC21■□□□□ 0.95
CCDC144BQ3MJ40 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC144BQ3MJ40 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC144BQ3MJ40 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CCDC144BQ3MJ40 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21■□□□□ 0.95
CCDC144BQ3MJ40 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC144BQ3MJ40 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC144BQ3MJ40 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC144BQ3MJ40 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC144BQ3MJ40 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC144BQ3MJ40 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CCDC144BQ3MJ40 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC21■□□□□ 0.95
CCDC144BQ3MJ40 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 FEM1AP3-201ENST00000403722 1741 ntBASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 AC012615.1-201ENST00000565797 1299 ntBASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 AC005332.3-201ENST00000589904 676 ntBASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 AC008764.6-201ENST00000595909 2069 ntBASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 KRT8P32-201ENST00000512863 1461 ntBASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC144BQ3MJ40 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC144BQ3MJ40 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC144BQ3MJ40 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC144BQ3MJ40 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CCDC144BQ3MJ40 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC144BQ3MJ40 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC144BQ3MJ40 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC144BQ3MJ40 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC144BQ3MJ40 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC144BQ3MJ40 PVRIG2P-201ENST00000435460 978 ntBASIC20.98■□□□□ 0.95
CCDC144BQ3MJ40 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC144BQ3MJ40 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC144BQ3MJ40 AP003733.1-201ENST00000491725 852 ntBASIC20.98■□□□□ 0.95
CCDC144BQ3MJ40 FOSL1P1-201ENST00000511041 816 ntBASIC20.98■□□□□ 0.95
CCDC144BQ3MJ40 AC091304.2-201ENST00000564639 760 ntBASIC20.98■□□□□ 0.95
CCDC144BQ3MJ40 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC144BQ3MJ40 AL121772.3-201ENST00000610840 674 ntBASIC20.98■□□□□ 0.95
CCDC144BQ3MJ40 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC144BQ3MJ40 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CCDC144BQ3MJ40 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC144BQ3MJ40 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC144BQ3MJ40 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CCDC144BQ3MJ40 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CCDC144BQ3MJ40 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC144BQ3MJ40 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
CCDC144BQ3MJ40 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC144BQ3MJ40 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC144BQ3MJ40 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC144BQ3MJ40 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC144BQ3MJ40 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CCDC144BQ3MJ40 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CCDC144BQ3MJ40 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC144BQ3MJ40 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC144BQ3MJ40 AL390719.2-201ENST00000606993 987 ntBASIC20.97■□□□□ 0.95
CCDC144BQ3MJ40 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.97■□□□□ 0.95
CCDC144BQ3MJ40 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC144BQ3MJ40 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC144BQ3MJ40 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CCDC144BQ3MJ40 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC144BQ3MJ40 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC144BQ3MJ40 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC144BQ3MJ40 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CCDC144BQ3MJ40 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC144BQ3MJ40 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC144BQ3MJ40 AC012313.1-201ENST00000593393 3059 ntBASIC20.96■□□□□ 0.95
CCDC144BQ3MJ40 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms