Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PDS5AQ29RF7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.6■■□□□ 1.05
PDS5AQ29RF7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDS5AQ29RF7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.6■■□□□ 1.05
PDS5AQ29RF7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDS5AQ29RF7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PDS5AQ29RF7 SCARNA2-201ENST00000458748 420 ntBASIC21.6■■□□□ 1.05
PDS5AQ29RF7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC21.6■■□□□ 1.05
PDS5AQ29RF7 MTDHP3-201ENST00000594186 672 ntBASIC21.6■■□□□ 1.05
PDS5AQ29RF7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PDS5AQ29RF7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDS5AQ29RF7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PDS5AQ29RF7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDS5AQ29RF7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDS5AQ29RF7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PDS5AQ29RF7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.6■■□□□ 1.05
PDS5AQ29RF7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.6■■□□□ 1.05
PDS5AQ29RF7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
PDS5AQ29RF7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDS5AQ29RF7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDS5AQ29RF7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDS5AQ29RF7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDS5AQ29RF7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PDS5AQ29RF7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDS5AQ29RF7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDS5AQ29RF7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.59■■□□□ 1.05
PDS5AQ29RF7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDS5AQ29RF7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDS5AQ29RF7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC21.59■■□□□ 1.05
PDS5AQ29RF7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDS5AQ29RF7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDS5AQ29RF7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.59■■□□□ 1.05
PDS5AQ29RF7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
PDS5AQ29RF7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
PDS5AQ29RF7 AF186996.4-201ENST00000467186 377 ntBASIC21.59■■□□□ 1.05
PDS5AQ29RF7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
PDS5AQ29RF7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PDS5AQ29RF7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.59■■□□□ 1.05
PDS5AQ29RF7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC21.59■■□□□ 1.05
PDS5AQ29RF7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PDS5AQ29RF7 AL139288.1-201ENST00000623748 933 ntBASIC21.59■■□□□ 1.05
PDS5AQ29RF7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC21.59■■□□□ 1.05
PDS5AQ29RF7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC21.59■■□□□ 1.05
PDS5AQ29RF7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDS5AQ29RF7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDS5AQ29RF7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.59■■□□□ 1.05
PDS5AQ29RF7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.59■■□□□ 1.05
PDS5AQ29RF7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDS5AQ29RF7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.59■■□□□ 1.05
PDS5AQ29RF7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDS5AQ29RF7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDS5AQ29RF7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
PDS5AQ29RF7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDS5AQ29RF7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
PDS5AQ29RF7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PDS5AQ29RF7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PDS5AQ29RF7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDS5AQ29RF7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDS5AQ29RF7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDS5AQ29RF7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDS5AQ29RF7 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.58■■□□□ 1.05
PDS5AQ29RF7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC21.58■■□□□ 1.05
PDS5AQ29RF7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC21.58■■□□□ 1.05
PDS5AQ29RF7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC21.58■■□□□ 1.05
PDS5AQ29RF7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.58■■□□□ 1.05
PDS5AQ29RF7 AP001005.1-201ENST00000571755 1248 ntBASIC21.58■■□□□ 1.05
PDS5AQ29RF7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PDS5AQ29RF7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21.58■■□□□ 1.05
PDS5AQ29RF7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDS5AQ29RF7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDS5AQ29RF7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.58■■□□□ 1.05
PDS5AQ29RF7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PDS5AQ29RF7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDS5AQ29RF7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDS5AQ29RF7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PDS5AQ29RF7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PDS5AQ29RF7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
PDS5AQ29RF7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PDS5AQ29RF7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PDS5AQ29RF7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC21.58■■□□□ 1.04
PDS5AQ29RF7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PDS5AQ29RF7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.58■■□□□ 1.04
PDS5AQ29RF7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDS5AQ29RF7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.57■■□□□ 1.04
PDS5AQ29RF7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21.57■■□□□ 1.04
PDS5AQ29RF7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
PDS5AQ29RF7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDS5AQ29RF7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC21.57■■□□□ 1.04
PDS5AQ29RF7 COX5BP2-201ENST00000392354 334 ntBASIC21.57■■□□□ 1.04
PDS5AQ29RF7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDS5AQ29RF7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC21.57■■□□□ 1.04
PDS5AQ29RF7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PDS5AQ29RF7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC21.57■■□□□ 1.04
PDS5AQ29RF7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC21.57■■□□□ 1.04
PDS5AQ29RF7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC21.57■■□□□ 1.04
PDS5AQ29RF7 AC073592.4-201ENST00000623827 446 ntBASIC21.57■■□□□ 1.04
PDS5AQ29RF7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.57■■□□□ 1.04
PDS5AQ29RF7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PDS5AQ29RF7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PDS5AQ29RF7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms