Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CBX1P83916 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
CBX1P83916 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX1P83916 BX842568.3-201ENST00000418104 571 ntBASIC18.94■□□□□ 0.62
CBX1P83916 SLC7A5P2-201ENST00000553010 536 ntBASIC18.94■□□□□ 0.62
CBX1P83916 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX1P83916 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CBX1P83916 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX1P83916 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CBX1P83916 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CBX1P83916 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.94■□□□□ 0.62
CBX1P83916 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CBX1P83916 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CBX1P83916 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.94■□□□□ 0.62
CBX1P83916 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX1P83916 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
CBX1P83916 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX1P83916 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX1P83916 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX1P83916 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CBX1P83916 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CBX1P83916 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.94■□□□□ 0.62
CBX1P83916 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX1P83916 AC104640.1-201ENST00000562617 2109 ntBASIC18.94■□□□□ 0.62
CBX1P83916 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.94■□□□□ 0.62
CBX1P83916 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX1P83916 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC18.94■□□□□ 0.62
CBX1P83916 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CBX1P83916 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.93■□□□□ 0.62
CBX1P83916 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.93■□□□□ 0.62
CBX1P83916 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBX1P83916 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBX1P83916 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
CBX1P83916 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CBX1P83916 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC18.93■□□□□ 0.62
CBX1P83916 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.93■□□□□ 0.62
CBX1P83916 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CBX1P83916 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.93■□□□□ 0.62
CBX1P83916 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
CBX1P83916 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBX1P83916 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CBX1P83916 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CBX1P83916 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBX1P83916 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.93■□□□□ 0.62
CBX1P83916 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBX1P83916 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.93■□□□□ 0.62
CBX1P83916 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CBX1P83916 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CBX1P83916 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBX1P83916 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CBX1P83916 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CBX1P83916 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.93■□□□□ 0.62
CBX1P83916 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CBX1P83916 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CBX1P83916 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBX1P83916 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CBX1P83916 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBX1P83916 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CBX1P83916 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CBX1P83916 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CBX1P83916 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CBX1P83916 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.92■□□□□ 0.62
CBX1P83916 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CBX1P83916 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.92■□□□□ 0.62
CBX1P83916 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CBX1P83916 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CBX1P83916 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC18.92■□□□□ 0.62
CBX1P83916 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CBX1P83916 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CBX1P83916 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CBX1P83916 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.92■□□□□ 0.62
CBX1P83916 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.92■□□□□ 0.62
CBX1P83916 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.92■□□□□ 0.62
CBX1P83916 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.92■□□□□ 0.62
CBX1P83916 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CBX1P83916 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
CBX1P83916 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CBX1P83916 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CBX1P83916 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CBX1P83916 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.92■□□□□ 0.62
CBX1P83916 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.92■□□□□ 0.62
CBX1P83916 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CBX1P83916 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CBX1P83916 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CBX1P83916 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CBX1P83916 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CBX1P83916 AL513523.2-202ENST00000427283 2040 ntBASIC18.91■□□□□ 0.62
CBX1P83916 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CBX1P83916 MTMR9LP-203ENST00000426597 1545 ntBASIC18.91■□□□□ 0.62
CBX1P83916 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CBX1P83916 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CBX1P83916 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.91■□□□□ 0.62
CBX1P83916 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CBX1P83916 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CBX1P83916 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CBX1P83916 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.91■□□□□ 0.62
CBX1P83916 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CBX1P83916 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CBX1P83916 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CBX1P83916 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms