Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMPD1P17405 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMPD1P17405 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMPD1P17405 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMPD1P17405 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMPD1P17405 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.06■□□□□ 0.8
SMPD1P17405 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.06■□□□□ 0.8
SMPD1P17405 AC010460.3-201ENST00000511359 1579 ntBASIC20.06■□□□□ 0.8
SMPD1P17405 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.06■□□□□ 0.8
SMPD1P17405 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.06■□□□□ 0.8
SMPD1P17405 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
SMPD1P17405 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMPD1P17405 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMPD1P17405 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMPD1P17405 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.06■□□□□ 0.8
SMPD1P17405 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMPD1P17405 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SMPD1P17405 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMPD1P17405 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMPD1P17405 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMPD1P17405 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SMPD1P17405 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMPD1P17405 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.05■□□□□ 0.8
SMPD1P17405 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMPD1P17405 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SMPD1P17405 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMPD1P17405 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SMPD1P17405 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMPD1P17405 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.05■□□□□ 0.8
SMPD1P17405 AC096633.1-201ENST00000422446 749 ntBASIC20.05■□□□□ 0.8
SMPD1P17405 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.05■□□□□ 0.8
SMPD1P17405 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.05■□□□□ 0.8
SMPD1P17405 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
SMPD1P17405 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.05■□□□□ 0.8
SMPD1P17405 UNC93B6-202ENST00000528242 690 ntBASIC20.05■□□□□ 0.8
SMPD1P17405 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.05■□□□□ 0.8
SMPD1P17405 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SMPD1P17405 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SMPD1P17405 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SMPD1P17405 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMPD1P17405 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SMPD1P17405 AL031598.1-201ENST00000561511 1773 ntBASIC20.05■□□□□ 0.8
SMPD1P17405 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMPD1P17405 AC079776.2-201ENST00000641154 1609 ntBASIC20.05■□□□□ 0.8
SMPD1P17405 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SMPD1P17405 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMPD1P17405 PMPCAP1-201ENST00000508114 1576 ntBASIC20.04■□□□□ 0.8
SMPD1P17405 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.04■□□□□ 0.8
SMPD1P17405 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMPD1P17405 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.04■□□□□ 0.8
SMPD1P17405 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.04■□□□□ 0.8
SMPD1P17405 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMPD1P17405 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMPD1P17405 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SMPD1P17405 AC092183.1-201ENST00000469884 875 ntBASIC20.04■□□□□ 0.8
SMPD1P17405 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.04■□□□□ 0.8
SMPD1P17405 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.04■□□□□ 0.8
SMPD1P17405 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.04■□□□□ 0.8
SMPD1P17405 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.04■□□□□ 0.8
SMPD1P17405 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SMPD1P17405 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.04■□□□□ 0.8
SMPD1P17405 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMPD1P17405 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMPD1P17405 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMPD1P17405 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMPD1P17405 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.04■□□□□ 0.8
SMPD1P17405 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SMPD1P17405 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.03■□□□□ 0.8
SMPD1P17405 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMPD1P17405 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.03■□□□□ 0.8
SMPD1P17405 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMPD1P17405 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMPD1P17405 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMPD1P17405 AC005104.2-201ENST00000427818 678 ntBASIC20.03■□□□□ 0.8
SMPD1P17405 AL591424.1-201ENST00000442569 1213 ntBASIC20.03■□□□□ 0.8
SMPD1P17405 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SMPD1P17405 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.03■□□□□ 0.8
SMPD1P17405 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMPD1P17405 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMPD1P17405 AC055717.3-201ENST00000622967 595 ntBASIC20.03■□□□□ 0.8
SMPD1P17405 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SMPD1P17405 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SMPD1P17405 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.03■□□□□ 0.8
SMPD1P17405 KRT8P47-201ENST00000604727 1398 ntBASIC20.03■□□□□ 0.8
SMPD1P17405 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SMPD1P17405 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMPD1P17405 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.03■□□□□ 0.8
SMPD1P17405 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMPD1P17405 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.03■□□□□ 0.8
SMPD1P17405 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.03■□□□□ 0.8
SMPD1P17405 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMPD1P17405 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SMPD1P17405 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMPD1P17405 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.02■□□□□ 0.8
SMPD1P17405 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMPD1P17405 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.02■□□□□ 0.8
SMPD1P17405 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SMPD1P17405 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMPD1P17405 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SMPD1P17405 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms