Protein–RNA interactions for Protein: P12036

NEFH, Neurofilament heavy polypeptide, humanhuman

Predictions only

Length 1,026 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFHP12036 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NEFHP12036 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NEFHP12036 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NEFHP12036 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.4■□□□□ 0.54
NEFHP12036 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NEFHP12036 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NEFHP12036 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NEFHP12036 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
NEFHP12036 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NEFHP12036 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NEFHP12036 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NEFHP12036 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
NEFHP12036 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NEFHP12036 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
NEFHP12036 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NEFHP12036 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NEFHP12036 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
NEFHP12036 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NEFHP12036 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.39■□□□□ 0.53
NEFHP12036 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NEFHP12036 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NEFHP12036 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.39■□□□□ 0.53
NEFHP12036 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.39■□□□□ 0.53
NEFHP12036 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.39■□□□□ 0.53
NEFHP12036 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.39■□□□□ 0.53
NEFHP12036 UNC93B5-201ENST00000530315 699 ntBASIC18.39■□□□□ 0.53
NEFHP12036 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.39■□□□□ 0.53
NEFHP12036 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.39■□□□□ 0.53
NEFHP12036 PCDHA12-202ENST00000613593 2588 ntBASIC18.39■□□□□ 0.53
NEFHP12036 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NEFHP12036 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NEFHP12036 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NEFHP12036 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NEFHP12036 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NEFHP12036 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NEFHP12036 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.39■□□□□ 0.53
NEFHP12036 AC012317.2-201ENST00000623305 2251 ntBASIC18.39■□□□□ 0.53
NEFHP12036 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
NEFHP12036 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
NEFHP12036 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.39■□□□□ 0.53
NEFHP12036 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NEFHP12036 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NEFHP12036 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NEFHP12036 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.39■□□□□ 0.53
NEFHP12036 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NEFHP12036 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NEFHP12036 AC008556.1-201ENST00000610908 2040 ntBASIC18.39■□□□□ 0.53
NEFHP12036 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
NEFHP12036 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NEFHP12036 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.38■□□□□ 0.53
NEFHP12036 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NEFHP12036 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.38■□□□□ 0.53
NEFHP12036 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NEFHP12036 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NEFHP12036 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NEFHP12036 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NEFHP12036 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NEFHP12036 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.38■□□□□ 0.53
NEFHP12036 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.38■□□□□ 0.53
NEFHP12036 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.38■□□□□ 0.53
NEFHP12036 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NEFHP12036 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NEFHP12036 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
NEFHP12036 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
NEFHP12036 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NEFHP12036 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
NEFHP12036 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NEFHP12036 FLJ13224-201ENST00000313737 1514 ntBASIC18.38■□□□□ 0.53
NEFHP12036 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NEFHP12036 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NEFHP12036 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NEFHP12036 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.38■□□□□ 0.53
NEFHP12036 MYLKP1-201ENST00000509077 1580 ntBASIC18.38■□□□□ 0.53
NEFHP12036 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NEFHP12036 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NEFHP12036 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NEFHP12036 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NEFHP12036 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.37■□□□□ 0.53
NEFHP12036 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NEFHP12036 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NEFHP12036 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
NEFHP12036 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NEFHP12036 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.37■□□□□ 0.53
NEFHP12036 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NEFHP12036 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NEFHP12036 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.37■□□□□ 0.53
NEFHP12036 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.37■□□□□ 0.53
NEFHP12036 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.37■□□□□ 0.53
NEFHP12036 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NEFHP12036 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.37■□□□□ 0.53
NEFHP12036 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NEFHP12036 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.37■□□□□ 0.53
NEFHP12036 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NEFHP12036 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NEFHP12036 KRT8P3-201ENST00000519669 1449 ntBASIC18.37■□□□□ 0.53
NEFHP12036 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NEFHP12036 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NEFHP12036 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.37■□□□□ 0.53
NEFHP12036 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NEFHP12036 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms