Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRUB2O95900 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.97■□□□□ 0.63
TRUB2O95900 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.97■□□□□ 0.63
TRUB2O95900 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.97■□□□□ 0.63
TRUB2O95900 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TRUB2O95900 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.97■□□□□ 0.63
TRUB2O95900 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.97■□□□□ 0.63
TRUB2O95900 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRUB2O95900 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRUB2O95900 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.97■□□□□ 0.63
TRUB2O95900 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.97■□□□□ 0.63
TRUB2O95900 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRUB2O95900 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
TRUB2O95900 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.97■□□□□ 0.63
TRUB2O95900 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRUB2O95900 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRUB2O95900 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRUB2O95900 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRUB2O95900 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRUB2O95900 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.96■□□□□ 0.63
TRUB2O95900 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRUB2O95900 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRUB2O95900 IER3-202ENST00000376377 1350 ntBASIC18.96■□□□□ 0.63
TRUB2O95900 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.96■□□□□ 0.63
TRUB2O95900 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRUB2O95900 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TRUB2O95900 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
TRUB2O95900 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRUB2O95900 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRUB2O95900 IGHGP-201ENST00000390555 1178 ntBASIC18.96■□□□□ 0.63
TRUB2O95900 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
TRUB2O95900 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.96■□□□□ 0.63
TRUB2O95900 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.96■□□□□ 0.63
TRUB2O95900 SLC25A6P5-201ENST00000435663 894 ntBASIC18.96■□□□□ 0.63
TRUB2O95900 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.96■□□□□ 0.63
TRUB2O95900 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TRUB2O95900 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.96■□□□□ 0.63
TRUB2O95900 AP000550.4-202ENST00000639755 178 ntBASIC18.96■□□□□ 0.63
TRUB2O95900 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRUB2O95900 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRUB2O95900 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.96■□□□□ 0.63
TRUB2O95900 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRUB2O95900 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRUB2O95900 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRUB2O95900 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRUB2O95900 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRUB2O95900 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
TRUB2O95900 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRUB2O95900 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRUB2O95900 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TRUB2O95900 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.95■□□□□ 0.62
TRUB2O95900 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRUB2O95900 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.95■□□□□ 0.62
TRUB2O95900 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRUB2O95900 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRUB2O95900 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TRUB2O95900 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.95■□□□□ 0.62
TRUB2O95900 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRUB2O95900 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TRUB2O95900 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.95■□□□□ 0.62
TRUB2O95900 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRUB2O95900 AC113404.2-201ENST00000507884 177 ntBASIC18.95■□□□□ 0.62
TRUB2O95900 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.95■□□□□ 0.62
TRUB2O95900 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.95■□□□□ 0.62
TRUB2O95900 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.95■□□□□ 0.62
TRUB2O95900 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.95■□□□□ 0.62
TRUB2O95900 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.95■□□□□ 0.62
TRUB2O95900 AC005332.3-201ENST00000589904 676 ntBASIC18.95■□□□□ 0.62
TRUB2O95900 AC011498.5-201ENST00000592027 486 ntBASIC18.95■□□□□ 0.62
TRUB2O95900 AC091076.1-201ENST00000610741 619 ntBASIC18.95■□□□□ 0.62
TRUB2O95900 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRUB2O95900 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRUB2O95900 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRUB2O95900 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRUB2O95900 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
TRUB2O95900 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TRUB2O95900 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRUB2O95900 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRUB2O95900 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.94■□□□□ 0.62
TRUB2O95900 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRUB2O95900 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRUB2O95900 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.94■□□□□ 0.62
TRUB2O95900 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRUB2O95900 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRUB2O95900 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRUB2O95900 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRUB2O95900 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.94■□□□□ 0.62
TRUB2O95900 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.94■□□□□ 0.62
TRUB2O95900 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.94■□□□□ 0.62
TRUB2O95900 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
TRUB2O95900 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TRUB2O95900 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TRUB2O95900 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
TRUB2O95900 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.94■□□□□ 0.62
TRUB2O95900 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRUB2O95900 GPR32P1-201ENST00000601788 811 ntBASIC18.94■□□□□ 0.62
TRUB2O95900 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.94■□□□□ 0.62
TRUB2O95900 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRUB2O95900 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRUB2O95900 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms