Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMAD9O15198 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.45■□□□□ 0.22
SMAD9O15198 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMAD9O15198 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMAD9O15198 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMAD9O15198 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.45■□□□□ 0.22
SMAD9O15198 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMAD9O15198 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMAD9O15198 AC073592.3-201ENST00000625118 1834 ntBASIC16.45■□□□□ 0.22
SMAD9O15198 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMAD9O15198 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMAD9O15198 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SMAD9O15198 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SMAD9O15198 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.44■□□□□ 0.22
SMAD9O15198 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.44■□□□□ 0.22
SMAD9O15198 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
SMAD9O15198 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMAD9O15198 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMAD9O15198 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMAD9O15198 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMAD9O15198 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SMAD9O15198 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMAD9O15198 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.44■□□□□ 0.22
SMAD9O15198 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMAD9O15198 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMAD9O15198 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMAD9O15198 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMAD9O15198 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMAD9O15198 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMAD9O15198 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.44■□□□□ 0.22
SMAD9O15198 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMAD9O15198 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.44■□□□□ 0.22
SMAD9O15198 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.44■□□□□ 0.22
SMAD9O15198 HYMAI.1-201ENST00000620949 238 ntBASIC16.44■□□□□ 0.22
SMAD9O15198 AC079602.3-201ENST00000623931 403 ntBASIC16.44■□□□□ 0.22
SMAD9O15198 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.44■□□□□ 0.22
SMAD9O15198 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMAD9O15198 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.44■□□□□ 0.22
SMAD9O15198 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMAD9O15198 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMAD9O15198 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMAD9O15198 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SMAD9O15198 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMAD9O15198 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.44■□□□□ 0.22
SMAD9O15198 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMAD9O15198 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SMAD9O15198 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMAD9O15198 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.43■□□□□ 0.22
SMAD9O15198 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMAD9O15198 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SMAD9O15198 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SMAD9O15198 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.43■□□□□ 0.22
SMAD9O15198 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.43■□□□□ 0.22
SMAD9O15198 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.43■□□□□ 0.22
SMAD9O15198 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.43■□□□□ 0.22
SMAD9O15198 AC092597.1-201ENST00000487352 616 ntBASIC16.43■□□□□ 0.22
SMAD9O15198 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMAD9O15198 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.43■□□□□ 0.22
SMAD9O15198 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.43■□□□□ 0.22
SMAD9O15198 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMAD9O15198 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.43■□□□□ 0.22
SMAD9O15198 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.43■□□□□ 0.22
SMAD9O15198 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.43■□□□□ 0.22
SMAD9O15198 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.43■□□□□ 0.22
SMAD9O15198 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMAD9O15198 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SMAD9O15198 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.43■□□□□ 0.22
SMAD9O15198 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMAD9O15198 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMAD9O15198 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SMAD9O15198 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMAD9O15198 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMAD9O15198 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.43■□□□□ 0.22
SMAD9O15198 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.43■□□□□ 0.22
SMAD9O15198 SDHAP2-201ENST00000455183 2001 ntBASIC16.43■□□□□ 0.22
SMAD9O15198 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SMAD9O15198 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SMAD9O15198 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SMAD9O15198 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.43■□□□□ 0.22
SMAD9O15198 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.42■□□□□ 0.22
SMAD9O15198 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.42■□□□□ 0.22
SMAD9O15198 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.42■□□□□ 0.22
SMAD9O15198 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMAD9O15198 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SMAD9O15198 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMAD9O15198 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMAD9O15198 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMAD9O15198 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.42■□□□□ 0.22
SMAD9O15198 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMAD9O15198 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMAD9O15198 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SMAD9O15198 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMAD9O15198 PVRIG2P-201ENST00000435460 978 ntBASIC16.42■□□□□ 0.22
SMAD9O15198 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.42■□□□□ 0.22
SMAD9O15198 AL671277.2-201ENST00000458060 996 ntBASIC16.42■□□□□ 0.22
SMAD9O15198 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.42■□□□□ 0.22
SMAD9O15198 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.42■□□□□ 0.22
SMAD9O15198 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.42■□□□□ 0.22
SMAD9O15198 KRT18P35-201ENST00000510488 1269 ntBASIC16.42■□□□□ 0.22
SMAD9O15198 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms